Pseudomonas helleri DSM 29165, TU84_RS09850
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. DSM 29165 5_388921_28.3315, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CATTGGTCACCTTGATCCCGCGATTGCTGGCGGCCTGCAAATCGACTTCTTCATAGCCAGCGCCAATCACGCAGATGATGCTGAGCAAGGGCAGGGCGGC CATTTCATCGTCACGCAAGCCCAGCGGGCCGCGGGTCAGCACGACGTCAATACGTGCGCCGTGAGTGGCGATGGCCTCGGCGCGGCTGGCGGCGCTGGGC GCAAGAATCAGTTCATAACCCTGGTCCTCCAGCAGATACAGACAGTCGTTAACCGTTTCAACCAGCACCAGCACTACGTGGCCCATGGGGAGACTCCAGA CAGGATTGACCGAGAATGAGGCGAGATTAGCACCTCTGTCCCGGGGTTTTCCCTGTATCAACTTGATACAAACGCTCTATTTGGAGGTTTTTTCATCTGC GCGTCGGATGTTCGGGCTTTGCCTGCGTGCTGCGCTGGAGCCGAGCCGGGTCGGCCTGTTAAGATTCGCCCTTTGTTTTATCTTCACTTCGAGATCGCTC
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| DNA Sequence for Gene |
>TU84_RS09850
ATGACCACCGTTCGCACGCGCATCGCGCCATCACCGACTGGCGACCCCCACGTAGGTACCGCTTACATCGCTTTGTTCAACTACTGCTTTGCCAAGCAGC ATGGCGGCGAATTCATCCTGCGCATCGAAGACACTGACCAATTGCGTTCGACCCGCGAGTCTGAACAGCAGATCTTCGACGCCCTGCGCTGGTTGGGGAT CACCTGGAGCGAAGGCCCGGACGTAGGCGGCCCGCACGGTCCATACCGTCAAAGCGAGCGCAGTGACATCTACAAGCAATACACCCAGGAACTGGTCGAC AAGGGCTATGCGTTCCCGTGCTTCTGCACCGCAGAAGAGCTGGACCAAATGCGCGCCGAGCAAATGGCCAAGGGCGAAACCCCGCGTTACGACGGCCGTG CCTTGCTGCTGTCGCAAGAAGAAATCGACCGCCGCCTGGCCGCAGGCGAGCCGCACGTGATCCGCATGAAAGTGCCGACCGAAGGCGTGTGCGTGGTGCC GGACATGCTGCGTGGCGACGTCGAGATCCCGTGGGACCGCATGGACATGCAGGTACTGATGAAGGCTGACGGCCTGCCAACGTACTTTTTGGCCAACGTG GTCGATGACCACCTGATGGGCATCACCCACGTGCTGCGTGGCGAAGAATGGCTGCCATCGGCGCCAAAACTGATCCTGCTGTACGAATACTTTGGCTGGG AACAACCGCAGTTGTGCTACATGCCGCTGCTGCGTAACCCGGACAAGAGCAAGCTGTCCAAGCGCAAGAACCCGACGTCGGTGACGTTCTACGAGCGCAT GGGCTTTATGCCTGAGGCCATGCTCAATTACCTGGGCCGCATGGGCTGGTCGATGCCGGACGAGCGCGAGAAGTTCTCGCTGCAAGAAATGGTCGATAAT TTTGATCTGTCCCGTGTCTCTCTGGGCGGGCCGATTTTCGATATCGAAAAGCTTTCCTGGCTCAATGGCCAATGGCTGCGTGACTTGCCGCTGGAAGAGT TCGCCAGCCGCGTGCAGCACTGGGCGTTGAACCCCGACTACATGATGAAGATTGCGCCGCTGGTGCAGGGCCGGGTTGAAACCTTCAGCCAGATCGCGCC GTTGGCCGGATTCTTCTTCGCAGGCGGCGTGCAGCCGGATGCCAAGCTGTTTGAGCACAAAAAGCTCTCTGGCGATCAAGTACGCCAGTTGATGCAGTTG ATTTTGTGGAAGCTCGAAAGCCTGCGTCAGTGGGAGAAAGACGCGATCACGGCGTGCATTCAGACCGTGGTGGAAGCCCTTGAGCTAAAGCTGCGTGATG CCATGCCGCTGATGTTCGCTTCCATCACTGGCCAGGCCAGCTCGGTGTCGGTACTGGATGCCATGGAGATCCTGGGCCCGGACCTGACGCGCTTCCGTCT GCGTCAGGCGCTGGACCTGCTGGGTGGCGTATCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTCAGCGCAATGGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTCGCGTTTATTTGTAGTCGCTGCCGAAGGCTGCGAGAGGGGCCGAAGGTATTTTGGAACAGCAGGGCTGCTATGCAGCCCATCGCAGCCTGCGGCAGCG ACTACAAATTTAATCAGCGCGCCCCCGTGTTTTCGGGGTTTTAAGGGTAAGTGGTTGTTCTCACGACAAATTTTTTTAGAAATTTTTAAAAATAAGTTTG ACAGCCTACCGATCCAGTCTTAATATGCGGCCCGTCCACACAGCAACACGCAACATTGACTGTTTGGGGCTATAGCTCAGCTGGGAGAGCGCTTGCATGG CATGCAAGAGGTCAACGGTTCGATCCCGTTTAGCTCCACCAAATTTTAGGTTCACTGCCTGGCCACACCGGCATTGAATCGATCAGCACTCAGCGCTGAT CAAATAGAAGGTTTGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAGTTTCACA
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| Amino Acid Sequence |
>glutamyl-tRNA synthetase
MTTVRTRIAPSPTGDPHVGTAYIALFNYCFAKQHGGEFILRIEDTDQLRSTRESEQQIFDALRWLGITWSEGPDVGGPHGPYRQSERSDIYKQYTQELVD KGYAFPCFCTAEELDQMRAEQMAKGETPRYDGRALLLSQEEIDRRLAAGEPHVIRMKVPTEGVCVVPDMLRGDVEIPWDRMDMQVLMKADGLPTYFLANV VDDHLMGITHVLRGEEWLPSAPKLILLYEYFGWEQPQLCYMPLLRNPDKSKLSKRKNPTSVTFYERMGFMPEAMLNYLGRMGWSMPDEREKFSLQEMVDN FDLSRVSLGGPIFDIEKLSWLNGQWLRDLPLEEFASRVQHWALNPDYMMKIAPLVQGRVETFSQIAPLAGFFFAGGVQPDAKLFEHKKLSGDQVRQLMQL ILWKLESLRQWEKDAITACIQTVVEALELKLRDAMPLMFASITGQASSVSVLDAMEILGPDLTRFRLRQALDLLGGVSKKENKEWEKLFSAMA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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