Pseudomonas helleri DSM 29165, TU84_RS07260

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. DSM 29165 3_501754_35.9131, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATCAAACTTGCTGTCTTTGACGTCGATGGCGTACTGACCGACGGTCGCCTGTACTTCCTCGAAGACGGCAGCGAATTCAAGACCTTCAATACCCTGGACG GCCAAGGCATCAAGATGTTGATGGCCGGCGGTGTGCAGACCGCAATCATCAGTGGTCGCAAGACCCCGGTCGTTGAACGGCGCGCACAAAACCTGGGCAT CCCGCACCTCTATCAAGGGCGTGAAGATAAATTGGTGGTATTGGACGAGCTTCTCGGCCAACTCGACCTAAGCTATGAACAGGTTGCCTATTTGGGCGAC GACCTGCCCGACCTGCCCGTCATACGCCGGGTCGGCCTGGGCATGGCGGTGGCCAACGCTGCCGGTTTTGTTCGCGAGCACGCCCACGGCACTACCCAGG CACGCGGTGGCGAAGGTGCCGCCCGCGAATTTTGCGAACTGATCTTGCGCGCTCAAGGGCGCCTTGATGCAGCCCTCGCCGCCTACTTATAGAGCGTTTT
DNA Sequence for Gene
>TU84_RS07260
ATGCAGAGTAAAAAGATTCGCAACATTCTGTTATTCGCAGTCATTGCCGCGCTGTTTGCGGCCGTTGGCTACTGGAATATCAGCCCGGAGCGTTTTCTCG ACAAGCCTGTTGCGCCTGTCGATGACACCGCTATCGACTATTACGCAATCAATGCTCACAGCCTGCAGTTCTTGCCCGACGGCAAACTGCAATATGAGCT GACATCAGACAAGGTCGAACATTTGCAGGCTTCTGAAGTCACATTAATGACCAAGCCAGACATGCAAATTTTCCGCGGCACGCCCTTCCCGTGGCACGTT CAGAGCGAGCGCGGCGAAGTTAACCCGGACGGTACCCAGGTCGAACTCATCGATTCTGTACGCGTTGCACGCACCGACGAGAAAAACCGCACTACGATTA TTACCACGACCCGCATGACTGTATTCCCACAGAAGGAATATGCGCAGACCGACCGAGACGTTAGAATCGACGGCGCCGGTGGTGTGACGACTGGTAAGGG AATGAAAGCATATTTGAAAGACGGCAGGATGGACCTGCTGTCCAACGTAAGAGGACAGTATGAGTCTCGTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AACCCTCCCTTTATTGCTCAGCCTGAGCGCAGCACTGGGAAGCGCGAGCGCCTGGGCTCTGCCGGATGACAACAAGCAGCCTATCCGTATCCAGGCCGAC GAAGCCCAACTGGATGACAAGCAAGGCGTTGCGACTTACAAGGGCGATGTGATCATCACCCAAGGGTCCATGAAAATTACCGGTAACACCGTCACCCTTA CCCGCACCGCAGCGGGCGATATTGACGTGGTGACCTCGGTCGGCAACCTGGCGTATTTCGAACAACTGCAAAAAGTCGGTGATCCGAAACCGGTTCAGGC GTACGCCGTGACGATTCAATATCACGCGCCGCAAAACCGCATCGTGCTGATCGACAAGGCTAAAGTCATCAACGAAGGCAACACGACCGAAGGCGAGAAG ATCGTCTACGACACCGTGAAGCAAGTCGCCAATGCTGGCCGGGCCAATGGCACGAACGTCACTGCGCCTCGTCCGCGCATTGACATGGTGATCCAGCCAA
Amino Acid Sequence
>lipopolysaccharide ABC transporter permease
MQSKKIRNILLFAVIAALFAAVGYWNISPERFLDKPVAPVDDTAIDYYAINAHSLQFLPDGKLQYELTSDKVEHLQASEVTLMTKPDMQIFRGTPFPWHV QSERGEVNPDGTQVELIDSVRVARTDEKNRTTIITTTRMTVFPQKEYAQTDRDVRIDGAGGVTTGKGMKAYLKDGRMDLLSNVRGQYESR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site