Pseudomonas helleri DSM 29165, TU84_RS05060
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. DSM 29165 2_617688_39.188, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AACGCCCTGGCAACCCTGGCCGCCGCGCGCCATGTGGGCGTGGTACCGAGTTTGGCGATCGACGGTTTGAGCGCCTTTAAAAGCGTGAAGCGCCGTATGG AAAAAGTCGCTGAGGTGCAGGGCATCACTATTTATGACGACTTTGCGCACCACCCGACGGCGATTGCCACTACGCTGGACGGCCTGCGTAAACGCATCGG CGATGCGCCGTTGATCGCCGTGATTGAGCCGCGCTCCAACTCCATGAAGCTCGGTGCCCACCGTGACGGCTTGCCCGGCAGCGTGACCCAGGCCGATCAC GTGGTCTGGTATGCGCCGCCTAACCTCGGTTGGGACCTGGCCGCAACCGTGGCTTCAAGCTCGGTGCCGACGCGGGTGTGTGATTCGCTGGAAGCGATCA TTGCCGATGTGAAAGCCCAGGCCAAGCCGGGCACCCACGTGGTGATCATGAGCAACGGCGGCTTCGGCGGCCTGCATGGCAAGCTGGCGGAAGCGCTGCA
|
|
| DNA Sequence for Gene |
>TU84_RS05060
ATGAGCGGCCCGGAGCGCATTACCCTGGCCGTGACCGGCGCGTCGGGCATGCCCTACGCGTTGCGGCTGCTCGACTGCCTGGTACGCGAAGATCGCGAGG TGCATTTTTTGATCTCCAAGGCCGCGCAATTGGTGATGGCGACTGAAACCGACGTTAACTTGCCACCCAAGCCACAAGCCATGCAGACCTTTCTGACCGA ATACACGGGCGCTGCCGCAGGGCAGATTCGCGTTTACGGCAAGGAAGACTGGATGTCGCCCGTGGCGTCGGGGTCTGGAGCACCGGCTGCGATGGTGGTG GTGCCGTGTTCGACGGGTACGTTGTCAGCAATTGCCACAGGCGCTTGCAACAACCTGATTGAGCGGGCCGCGGACGTGACACTTAAAGAGCGTCGCCAAT TGATTCTGGTGCCGCGTGAGGCGCCGTATTCCAGTATCCACCTGGAAAATATGCTCAAGCTGTCGAACATGGGGGCCGTGATATTGCCCGCATCCCCTGG CTTCTATCACCAGCCGCAGACCATTGATGACCTGGTGGACTTCATGGTCGCGCGCATTCTGAATCTGCTGAACATCCCGCAAGACATGCTCCCGCGTTGG GGCGAGCACCATCTGGGCAGTAATGACTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGCTCTGCTGGCCCTATGGGTGCTGATCCAGATCGGCGGCTGCGCCAGCGTTCGTACGCTGGACGCTGCCAAGCCGGGGGCGCCGATTGTCTATTCCGGT ACGCGGCTGGACTGGTACGCACTGCAAGGCGGGTGTTGTGCGCAGGATCGTTTTGGCGCTCAGGCGCCGCGCTATCCGGGGCTGGATTTGCCGGCTAGTG CATTGCTGGACACGGTGTTGCTGCCGTTGTCAGTGCTGACTGTGCTGGGTGTCGGGTTTCAAGCCAGCGGCGGCCTTTGATACCGGGCTTTTATTGCCCG GCTCAGGCGCCGCATTAGTAACTGCCGCCGGTTATTTACCCAGCTTGCGCAGCTCATCCGACTCGACCACCCGCACACCTTTTTGCTCTTCCAGCGCTAA ACGCCACAAGGCCCGGGCCAGTTCGCAGGCTTCGATGCCGTGGTACTTGCCTGGAATCAGCTTGGACAGGGTGCCGGCAATTTTTTCTACGGGGCGTTCT
|
|
| Amino Acid Sequence |
>aromatic acid decarboxylase
MSGPERITLAVTGASGMPYALRLLDCLVREDREVHFLISKAAQLVMATETDVNLPPKPQAMQTFLTEYTGAAAGQIRVYGKEDWMSPVASGSGAPAAMVV VPCSTGTLSAIATGACNNLIERAADVTLKERRQLILVPREAPYSSIHLENMLKLSNMGAVILPASPGFYHQPQTIDDLVDFMVARILNLLNIPQDMLPRW GEHHLGSND
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|