Pseudomonas helleri DSM 29165, TU84_RS02000
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. DSM 29165 1_623802_43.7532, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGCTCTGGGTGTTGCTGATTTACTTCGGCAGCGTCAATGCGGTACGCGGCCTCGGCGAACTGATCGGCATGCCCGACCTCACCCTCAGCGCCTTCGCTG CCGGTGTTATCGCGCTGGGCCTGTGCTTTGGCGCGTATGCGACCGAAGTGTTTCGTGGCGCCATTTTGGCCATCCCCAAAGGCCACCGCGAAGCGGGCAT GGCATTGGGTCTGTCCAAGCCGCGCATTTTCACCAAACTGGTGCTGCCACAAATGTGGCGTATCGCCCTGCCCGGCCTGGGCAACCTGTTCATGATCCTG ATGAAAGACACCGCGCTGGTCTCGGTCATCGGCCTGGAAGAAATCATGCGTCAGGCGCAAAACGCCGTGACCTTCGCCAAACACCCCTTCACCTTCTACA TGGTGGCTGCCGTGATGTACCTGGGCCTGACCATCTTGGCCATGGGCACCCTGCACGTGCTTGAGAAACGCGCCGCACGCGGCTTCGTGAGGAGAACGTA
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| DNA Sequence for Gene |
>TU84_RS02000
ATGCAGGTGTGGGAACTCTTCATCAAATGGCTGCCCAAGCTGATCCAGGGCGCGACCCTGACGCTGGAGCTGACGGCACTGTCGGTCATCGCCGGTTTGA TCGTGGCCATTCCGCTGGGCATCGCCCGCTCCTCCAAGCTGTGGTACGTGCGCTCGCTACCGTACGGCTATATCTTTTTCTTTCGCGGCACACCGCTGCT GATCCAGCTGTTTCTGGTGTATTACGGGCTGGGGCAATTTGAAGCGGTGCGTGAAAGCGTGTTGTGGCCATACCTGCGCGACCCGTTCTGGTGTGCGGTA CTCACCATGACCCTGCACACGGCCGCCTACATCGCCGAGATTCTGCGCGGTGCGATCCAGGCCATCCCGCCGGGTGAAATCGAAGCGGCCCGTGCCCTGG GCATGTCACGCGGTAAAACCCTGCTGCACATCGTGCTGCCGCGTGCTGCACGCATCGGCCTGCCGGCGTACAGCAACGAGGTGATCCTGATGCTCAAGGC CAGTTCGCTGGCGAGTACCGTGACCTTGCTGGAACTGACCGGCATGACCCGTACCATCATTGCCCGCAACTACCAGACGGTGGACATGTTCCTGATCGCC GGGGTGATCTACCTGGTCATGTCGTTCGTACTGATCCAGGGCTTCAAACTGCTGGAGCGCTGGTTGCGCGTCGATGCCTGCCAAGGCCGTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCTTGAGGGCGAGCAACTGCTCGCCCGCTTTGAGGCGCTGGACGCGTTTTTACGTGAGCACCAGTCGCTGTGGCGCCCACGGCCATTCACGCAGCTGAAT ATGCCGTGGGAAGCCCACCATCCTGAACTGTCCCGGTGGTTACGCCAGCGCTCGTTGCACGACGCTGAAGCCAGCCATAACCAGCCTCATCAGCTAGGCG CCCCCGCCCCGTTCGCGACACTGGCAGCCACCGCCCTTGCACTGAGCAGCCTTGAGCGTTTACCCGTTCAGGCCCTGGCGCCAGCCGCGCCGCGCTTGCA AGTAGATGTGCCGGGGCGCAAATGGCAGCAAATCGAAGCCTTCGCACAAAGCCTGACCTTTAAGAAAACCCCCACGCATTGGCTGGACTGGTGCTCAGGC AAAGGCCATTTGGGCCGGCGCTTGATAACCGCAGAGCAACAACTGACGTGCCTGGAATACGACCCGGCGCTGGTCGAGGCCGGTTTGGCGCTCAGCCAGC
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| Amino Acid Sequence |
>ABC transporter permease
MQVWELFIKWLPKLIQGATLTLELTALSVIAGLIVAIPLGIARSSKLWYVRSLPYGYIFFFRGTPLLIQLFLVYYGLGQFEAVRESVLWPYLRDPFWCAV LTMTLHTAAYIAEILRGAIQAIPPGEIEAARALGMSRGKTLLHIVLPRAARIGLPAYSNEVILMLKASSLASTVTLLELTGMTRTIIARNYQTVDMFLIA GVIYLVMSFVLIQGFKLLERWLRVDACQGR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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