Strain | Pseudomonas sp. DSM 29165 1_623802_43.7532, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCTGAACATTCCGCAAGACAAACTGATGGCGCGCATTGCCGAACTGGACAAGCACAAGGGCAAGACCCTGATCCTGGTGGATGCAGCTGGCCAGCACTC CGGCACGCACGCACGCGAACTGCTCAAGGCTGGCTACAATGCCGCCAAGCTGTCCGGTGGTATTGCGACCTGGCGTGCAGATAACCTCCCAGTGGTGAAG TAACTATGTCCAAGGTCATCGTATATTCCAGCGACTATTGCCCTTACTGCATGCGAGCCAAGGCTTTGCTGGAGAAAAAGGGTGTTGCCTTCGAAGAAAT CAAAGTCGACGGCAAGCCTCAAGTTCGTGCAGAAATGACCCAAAAGGCAGGTCGTACCTCCGTTCCGCAAATCTGGATCGGCGAGCGGCATGTGGGTGGA TGCGATGACCTGTTTGCGCTCGAACGCGCAGGTAAATTGGATGCGCTGCTGAACGTCTGACTCTCATTCTCTAAAGCCCCAAGATGATCAAGGATCTGTG
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DNA Sequence for Gene |
>TU84_RS01795
ATGACTGACCAACAGAACACCGCTGCTGTTAGCGACGAAGACACTGCTCCACAATTCTCCCTGCAGCGTATTTACGTACGTGACCTGTCGTTTGAAGCGC CGAAAAGCCCGGCCATCTTCCGTCAGCAGTGGGAGCCGAGCGTTGCTTTGGACCTCAACACCCGCCAAAAGCCACTGGAAGGCGACTTCTTTGAAGTGGT TCTGACCTTGTCGGTCACCGTGAAAAACGCTGAAGAAGTGGCGTTTATTGCTGAAGTTCAGCAGGCTGGCATCTTCCTGATCAAAAACCTTGATCAAGCT TCGATGAGCCACACCCTGGGCGCGTTCTGCCCGAACCTGCTGTTCCCGTATGCCCGCGAAACTCTGGACAGCCTGGTTGTTCGTGGTTCGTTCCCGGCGT TGATGCTGGCTCCGGTGAACTTCGATGCTCTGTACGCCCAAGAGCTGCAGCGCATGCAAGAAGAAGGCAGCGCGACTGTTCAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACAGCGCCCCGCCCATAAAAAAAGCGCCTGAATGGCGCTTTTTTTATGGGTAACGTTGTATCCGCGGCTACTTAAACCCCAACTGGCGCCAGGCTTCGTA AACGGCCACAGCCACGGTGTTGGACAGGTTCAGGCTGCGGCAGCCTTCGCGCATGGGCAGGCGCAGGCGGTGATCGCTGTCTTGTGCGTCGAGCACCTCA GGCGGCAGGCCACGGCTTTCAGGGCCGAAGATAAAGGCGTCGCCTTCAGCAAACTGCACATCGTGGAACGGCCGCGAGCCTTTGGTGGTAAAAGCGAACA GGCGTGGATGGCCCAGGCTTTCCAGGCAACTGGCCAGGTCGGCATGGCGCTTGAGCGGCGCGTATTCGTGATAATCCAGACCTGCCCGGCGCAAGCGCTT GTCGTCCAGCTCAAAACCGATAGGCTCGATCAAGTGCAGGTGGCAGCCGCTGTTGGCGCAGAGCCTGATAATGTTGCCGGTATTCGGCGGAATTTCTGGT
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Amino Acid Sequence |
>preprotein translocase subunit SecB
MTDQQNTAAVSDEDTAPQFSLQRIYVRDLSFEAPKSPAIFRQQWEPSVALDLNTRQKPLEGDFFEVVLTLSVTVKNAEEVAFIAEVQQAGIFLIKNLDQA SMSHTLGAFCPNLLFPYARETLDSLVVRGSFPALMLAPVNFDALYAQELQRMQEEGSATVQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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