Pseudomonas helleri DSM 29165, TU84_RS22305
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. DSM 29165 18_106014_31.4187, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGTGCCAAAAGCACTGCTGTCCAACGAAGTTGATCGTCTGCGCGTGCAGGCTGTTCAGCAATTCGGTGGCAACATCAAGCCTGACCAACTGCCTGCCGAG CTGTTCGAAGAACAAGCCAAGCGCCGCGTTGTACTGGGTCTGATCGTTGCTGAAGTGGTTAAGCAGTTCGATCTGAAGCCTGACGAAGATCGCGTTCGCG ACATGATTCAGGAAATGGCTTCCGCTTACCAGGAGCCAGAGCAGGTTGTAGCGTGGTACTACAAAAATGATCAGCAATTGAACGAGGTTCGTTCTGTTGT GCTGGAAGAACAAGTTGTGGATACTGTTCTGCAGAAGGCTAAGGTGACCGATAAAGCGGTCTCTTACGAAGAAGCTGTCAAGCCGGTGGAAGCTCCACAA GCCGACTGATTTGTGATTCGTTAGAAAACACAACCATAAGCCAGCCTCGAGCTGGCTTATGCGTATTCCAGACAAGACTTTTTGGGAGTGACTGCCGGAC
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| DNA Sequence for Gene |
>TU84_RS22305
ATGTCCCGCAATTCTTATATTCAGCAGAACTCTGACATTCAGGCCGCAGGCGGCCTGGTCCCGATGGTTGTTGAGCAATCTGCTCGTGGCGAACGCGCCT ACGACATCTATTCGCGCCTTTTGAAGGAGCGGATCATCTTCCTGGTAGGCCCTGTCGAAGACTACATGGCCAACCTGGTAGCTGCGCAGTTGCTTTTCCT TGAAGCCGAAAACCCGGACAAGGACATCCATCTGTACATCAACTCCCCAGGCGGCTCGGTCACTGCAGGCATGTCGATCTACGACACTATGCAGTTCATC AAGCCAGACGTATCGACTATCTGCATTGGTCAGGCCTGCAGCATGGGTGCTTTCCTGCTGGCCGGTGGCGCACCGGGCAAGCGTCACTGCCTGCCTAACT CGCGCATGATGATTCACCAGCCATTGGGCGGTTTCCAGGGCCAAGCGTCGGATATCGACATCCATGCCAAAGAAATCCTCAACATCCGTCATCGCTTGAA CTCGTTGCTGGCCCATCACACCGGTCAGTCGCTGGAAACCATCGAGCGTGACACAGAGCGTGACAACTTCATGAGCGCTGAGCGTGCAGCCGAATACGGT TTGATCGACTCTGTGTTCAGCAAGCGTCAAATGCCCGCTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCAGCTCAAATGTAGGTGGTTGGATTAACCGACCACCTGCGGGCTTGAAAAAGCCCGCAGTTGCCTTCATCTTGTGTTGCAAGCCTATCGGATTTGGATC GATCGAATGACTGACACCCGCAACGGCGAGGACAACGGCAAATTGCTCTATTGCTCCTTCTGTGGCAAAAGCCAGCATGAAGTGCGCAAATTGATTGCCG GCCCCTCGGTGTTTATCTGCGACGAATGCGTCGACTTGTGCAACGACATCATCCGTGAGGAGGTGCAGGAAGCCCAAGCCGAAAGCAGCGCGCATAAATT ACCTTCGCCAAAAGAAATCAGCGGCATCCTTGATCAATACGTGATTGGTCAGGAACGTGCCAAAAAGGTTTTGGCTGTAGCGGTTTACAACCACTACAAG CGCCTGAACCAGCGTGACAAAAAGAACGACGACGTCGAACTCGGCAAGAGCAACATCCTGCTGATCGGACCTACCGGCTCGGGTAAAACCCTGCTGGCCG
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| Amino Acid Sequence |
>Clp protease ClpP
MSRNSYIQQNSDIQAAGGLVPMVVEQSARGERAYDIYSRLLKERIIFLVGPVEDYMANLVAAQLLFLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFI KPDVSTICIGQACSMGAFLLAGGAPGKRHCLPNSRMMIHQPLGGFQGQASDIDIHAKEILNIRHRLNSLLAHHTGQSLETIERDTERDNFMSAERAAEYG LIDSVFSKRQMPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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