Strain | Pseudomonas sp. DSM 29165 12_166604_24.976, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGAATGGCTGAATACAGCAGCCCTGGTACGCGGCCCGGTGTTCAGGGGTATTGATCGCTGGGGCAATTTGAGTGAGGAGGGCTTGCACGCTAATAGCGTG ATCCCGCTGCTGCGCCAGGCGCTGGAGCGCGCCGGTATTTCTGCCGAACATTACACCAGTCACTCGCTGCGTCGCGGTTTTGCAACATGGGCGCATCAAA GTGGATGGGACTTGAAGTCGCTGATGAATTACGTCGGCTGGAAAGACATCAAGTCAGCCATGCGCTATGTTGAGTCCACCCCGTTTGCCGGGATGAGCAT GACCGCTGAAAAACGCATTGGTAGCTGATCGACGTCAACTTGAAAGCCGGCCATTCGGTCCATATTTAGTTTTTGACTATTTATAGGGTCGGCTGATAGT CAAAACCAATCGTGAGCATCAGCTTTACCAATGAGCCAGATACGAAATGAGTTGTTAGGATTCACCCCATCAACTTTTCAACCCTGACGGAGAGTCAACG
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DNA Sequence for Gene |
>TU84_RS19010
ATGCCTATCATCAACAGCCAAGTAAAACCGTTCAAAGCTACTGCATACAAAAACGGCAGCTTCGTGGAAGTGTCGGACGCTGACCTGAAAGGCAAGTGGT CTGTAGTGTTCTTCTACCCAGCCGACTTCACCTTCGTTTGCCCAACCGAGCTGGAAGACCTGGCTGACAACTACGAAGAGTTCAAAAAACTCGGCGTGGA AATCTACAGCGTGTCGACTGACACCCACTTTGCTCACGCTGCCTGGCACAACACTTCGCCAGCCATCGGCAAAATCCAGTACACCATGATCGGCGACCCT ACGCTGACCATCTCCCGCAACTTCGACGTTCTGATCGAAGAAGCAGGTCTGGCTGACCGCGGTACTTTCGTGATCAACCCGGAAGGTCAGATCAAAATCG TTGAACTGAACGACGGCGGCGTTGGCCGTGACGCTTCCGAGCTGCTGCGCAAAATCAAGGCTGCTCAGTACGTTGCTGCTCACCCAGGCGAAGTATGCCC AGCTAAATGGAAAGAAGGTGAATCCACCCTCGCTCCTTCGCTGGACCTGGTTGGCAAGATCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTCTGTGAAGACTAGGGCGGTGATCCGCACCTGAGTTGTCAGCAGCATCGCCCTCAAAACGCCCGGGCGACATTCGCTCGGGCGTTTTTTTTGACACAGA ATTAAACAGTTAGGAGATCGCCCGTATGTTGGACGCCAATCTAAAAGCACAGTTGAAGTCATACCTGGAGCGGGTCACACAGCCGATCGAGATCGTTGCG TCTCTCGACGACGGTGCGAAATCCCGTGAAATGCATGACCTGTTAAAAGAAATTACCAGCCTCTCCAGCCAGATTACCTTGCTGGAAAACGGCAACGATG CGCGCAAACCGTCGTTCTCGTTGAACCGTCCAGGCGGCGATATCAGCTTGCGTTTTGCTGGTATCCCGATGGGCCACGAATTTACTTCGCTGGTGCTGGC CCTGTTGCAAGTCGGCGGCCACCCATCGAAAGCCAGTGCCGAAGTGATTGAACAAATCCGCTCCCTTAAAGGTGAGTTCAACTTCGAGACGTATTTCTCG
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Amino Acid Sequence |
>alkyl hydroperoxide reductase subunit C
MPIINSQVKPFKATAYKNGSFVEVSDADLKGKWSVVFFYPADFTFVCPTELEDLADNYEEFKKLGVEIYSVSTDTHFAHAAWHNTSPAIGKIQYTMIGDP TLTISRNFDVLIEEAGLADRGTFVINPEGQIKIVELNDGGVGRDASELLRKIKAAQYVAAHPGEVCPAKWKEGESTLAPSLDLVGKI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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