Pseudomonas sp. DSM 28140, TU87_RS17760
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. DSM 28140 9_165737_32.7228, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGGCCTCTATGGCTGGCGATGCGGGGCGTGGCTTTGCCGTGGTGGCGGACGAGGTACAACGTTTGGCCGAGCGTTCGTCGGCGGCCACGCGTCAGATCGA AACACTGGTGCGGGCCATTCAGGCCGACACCAATGAGGCCGTGATCTCAATGGAGCAAACCACCACTGAGGTGGTGCGCGGCGCCCGTTTGGCGCAAGAC GCGGGCGTGGCGCTGGAAGAGATCGAAGGCGTGTCGCAAAACCTGGCCGAGCTGATTCAAAGCATCTCCAATGCCGCGCAGCAGCAAACCACCTCGGCGG GTCAGATTTCCTTGACCATGAGCGTCATTCAGCAAATCACCAGCCAAACTTCATCCGGGTCAACCGCTACCGCCGACAGCATTGGCAACCTGGCCAAAAT GGCCAGCCAACTGCGGCGCTCGGTGTCCGGTTTTACCTTGCCGGACACGCAAAAAACACCAGGGCCTCACTAGTGCGGCGTACGTTTGAGGGGAGTCGTT
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| DNA Sequence for Gene |
>TU87_RS17760
ATGGTTGACCGGCACGACTATGTGGCCCTTGAGTGGGTCAAAGACGAAATTGCCGGCACCTTAAAGCAGGCTCGCGTGGCACTGGACAGCGACGGCCAGC AAGCGACGCCCGAAGCGCTGGCGCAGTGTCTGGCGTGCGTGCATCAGGTGCATGGCAGCTTGTTGATGGTCGAGTTTTACGGCGCAGCCCTGCTGGCAGA AGAGATGGAGCAACTGGTGATCGCGTTGCAACAGCGCCGCGTCAGCCAGCTCGACGAAGCGGTACGTGTGCTGCAACAGGCCTTCAACCAATTGCCGTTG TACCTGGAGCGCGTCCACAGCGCCCGGCGCGACTGGCCGTTGGTGGTGTTGCCGTTGATCAACGACTTGCGCACTGCCAGGGGCGAGTCGCTGTTGTCAG AAACCAGTTTGTTCAGCCCGCCGTTGCAGGTGCTGGCGCCGCTTGATCACGCGACCTTGACGCAACGCTCCCCGGCCGACCTGCCTGCGCAGGTGCGCGC TTGGCGCCAAACCCTGCAAACGTCGCTGTTGGGGTTGCTGCGCGAAGACGATGTGCAGCGCCAACTGGAGCAACTGGCCAGTGTGTTTACGCAACTCGAA GCGCTGTGTCAGGGTGCGCCGCTCAATGCGCTGTGGGAAATCGCCACGGCGCTGGTCGAAGGCATGCTCAAGGGCAAAGTGGGCAACAGCCCGGCCTTGC GCAGCTTGCTCAGAGACGCTGACAAAGAACTCCAGCGTTTACACACGCAGGGGATTGAAGCGCTTAACCAGCCTGCCTCTGATGTGCTGCTCACCAGCCT GCTGTTTTACATCGCCAAGGCCGAGCGCCCGACGCCGAAAATGCTCAGTTTGAAAAACCATTACGAGCTGGACGAAGCCATGCCCGACGCGGCAATGGTC GACGAAGAGCGTGCGCGCCTCGCCGGTCCCGACCGGGACGCCATGCGCTCGGTGGTGGCCGCCTTGTGCGATGAGCTGGTGCGGGTCAAAGAGCGTCTTG ACCTGTTTGTGCGCAGTGACCGCACGCATGTGTCCGAACTCAACAGTTTGATGGCGCCCTTGCGCCAAATCGCCGACACCTTGGCCGTGCTGGGTTTCGG CCAGCCACGCAAGGTCATCATCGACCAGTTGGCCGTGGTCCAGAGCTTGGCCCAGGGTCAGCGCGAACCCACGGATGCCGTGTTGATGGATGTGGCAGCG GCGCTGTTGTACGTCGAAGCCACGCTGGCGGGCATGGTGGGTACTGTCGAGCCTTCGCAGCGTGAAGAAAGCCGCTTGCCGACCACCGACTTGATGCAGA TTCACCAATGGGTGATCAAAGAAGCGCGCATCGTCTTCGATGAAGCCAAAGACTTGATCAGCGACTCTCTGGCGGGCGGTTTTGATCGTCAACATTTGCA GCCCGTCCCTGCACTGCTCACGCAAATTCGCGGGGCGCTGGCGATGATTCCGCTGAACCGCGCCGCCGACTTGCTGCAAGCCTGCGACGATTACCTGTGT GAGCATTGGTTGCTGGGCACTGAGCCTGTGACCGCGCAGCACATCGACCGCCTGGCTGACGCGCTGGTGAGCATCGAATACTACTTGGAGCGCCTGGCCC AAGACCCTGGCGCGGCGGGCGAGCAGGTGCTGGACCGGGCCGAAAGCAGCCTCATCGCGCTGGGCTATGCGCCGACCGAACGCCATGTGCCGCTGCTCGA AGACATCCTCAGCCCCACCGAGGTGCTGGTGATGCAGGATTTGCAGGCGCTGCAAGACCCCGAGGTCATGCAGAGCCTGGCCGAGGTGCTGGCAAACCCG GTGTCGGCGCTCAACCCGCCCGCGCAACACATTCCCGCCAGCTTGCTGCCGCCCCCCGTGGATGAAGCGCGGGTAGACGAAGAACTGTTAGACGTTTTTC TCGAAGAAACCGATGAAGTGCTGAACATGCTGCACCACGCCTTGCCGCAGTGGGTTGCCAACCCGGCGGACAGCGCTGCGCTGGCTGAACTGCGGCGCGG TTTCCATACGCTCAAAGGCAGCGGACGCATGGTGCGCGCGCTGGTGCTGGGCGAGTTGGCATGGGCGGTCGAAAACCTGCTCAACCGTGTGATTGAACGC AAGGTTGCGCCGGCCCCGGCGATCTATCAGTTACTCGAAGATGTACTGCGCGTGCTGCCCGGTTTGATTCAAGCGTTTGCCGAGGGGCGTCAACGTCAGT GCGATGACGTCGACACACTGGCCGCCCAAGCCCATCACCTGTCCAAAGGTCATCCACTGCCGTTGTTGATTGAGCAAGAGACCCTCGGTTTCGACCCGCA ATTGCTCGATATTTTCCGTCAAGAAGCGCACAGCCACCTCGACACACTTAACCGTTTTCTCGATCACGCCAGCGAGCAACTGCCGCTGTATGCCAGCGAC GAATTGCAGCGTGCCGTGCACACCCTCAAAGGCAGTGCGCACATGGCGGGTGTGTTGCGCATGGCTGAGCTGGCCGCACCGCTGGACCATTTGGTGCGTG AATACAAAGCACACCATCTGGCGTTGGACTTGGACGAAATCGAGCTGCTGCTTGAGGCCGACAGCCTGCTGCACCGCGGCCTGAAACAGTTGGACAGTGA TCCGCTGGCCGAGATTCACGGTGCCCGCTCGCTGATTGAGCGCACTGAGCACCTGATTGCCGACCGCCTGGACGTCCTGCTCAACACGCCCGGCAATGCG GTGAAGCTCACCCGTGACCCGCAGCGCATCGGCGCATTTCTGGAGCAGGGCATGGACACCCTGTTTGAGGCCGAAGACGTGCTGCGCCATTGGCGGCAAC AGCCGCACGAGCGCGCAGGTCTCGACACGTTGCTGGACCAATTGACCGCGCTGGGTGAGTCAGCGCACTTGCTGGATTTACAGCCCGTCGATGCCCTGTG CGAAGCCTTGCTTGACCTGTACGGCGCAGTGGAAGAAAGCAGCCTGGCCGTTAGTGCGCGTTTTTTTGACGAAGCCGAACAGGCTCACGAAGCGTTGATC AACATGCTCGACCAACTGGCCGCGGGCCAGGACATTACCCCGCAACCGACCCGCATTGACGCGCTGCACCGGTTGCTGCACGAAGGGTTGGCGCCCGACG CCACGGGCCTGATTCGACGTGAGGGCAGCCAAACCCTCGACATCACCGAGTTGGGGGCTGCCACGGCTCATTTGCAGGCAGGCACATTGGCGGGCGAAGG CGAGTCGATGGATGACGAAATCGTCGCCATCTTTCTGGAAGAGGCGGTCGACATCCTTGATAGCGCGGGCCAGGCCTTGCAGCGCTGGCTGAGTGAGCCG GAGAGTCTGGCACCGCTGTCTTCGTTGCAGCGTGACTTGCACACCCTCAAAGGCGGGGCGCGCATGGCGGGCATTGGTCCGGTGGGCGACCTGGCCCAAG AACTGGAGCATTTGTACGAAGGTCTGCTGGATCGGCGCGCCAGCGAAAGCCCGGCGCTGGCCGACTTGCTGCAACGTAGCCATGCGCAGTTGGCGCTGAT GCTCGAACACCTGCAACAGCAGCAACCGTTGCGCGAACCCGACCAATTGATCGACGCCATTCGCGGGTTTCGGCATCACCCCCACCTGGCTGCCGAACTG CCCGTCGCACCGCCTGATGGGGCCTCAGGCGGCGACACTGAACTGCGGGACATCTTTCTCGAAGAAGCCTTCGACATTCTCGAAAGCTCCGGCGCTGCGC TGACGCGCTGGCAAGCCGAGCCTCAAGGAACGGTGGAGGTCGAAAACCTGCTGCGAGACCTGCACACTCTCAAGGGCGGGGCACGGATGGTTGAAATCGC CGCCATCGGTGATTTTGCCCACGAGCTGGAAACCCTGCTCGAAGATGTGTCAGCAGGCGTGCTGCCTCCCGGTGCCGATTTGTTCGCCTTGTTGCAGAAC TGTCATGACCGGGCTGCACAAATGCTGGATGCGCTGCGCAGCGGTCAGCCTGTGCAGTCGCCCCAGGATTTGATCGAACGCATTCGTGACACCGAGCGCA ATGCCCGGCACGCGGTTCAAGCGCCCGCCTCGACGAAGGTTGAACCCCAGGGCGCCGCCATGACCGAAGGGGAGCGCACGGGCCTGGACATGGTCAAGGT GCCTGCCGAGTTGCTGGAAGACATGGTTAACCTGTCAGGTGAAACCTCGATTATCCGGGGTCGCCTTGAGCAGCAAATCAATGATGGCCAGGTTGCGCTC AACGAAATGCAGACCACCCTTGAGCGCATGCGCGACCAATTGCGGCGTCTGGACACTGAAACCCAGGGCCAGCGCCACAGTCGTGGGCACACTGAAAGCG ATGGTCTGGCGTACGACGAATTTGACCCGCTGGAAATGGACCGTCACTCCCAGCTGCAACAGTTGTCTCGGGCGTTATTTGAATCTGCGTCCGACTTGCT CGACCTCAAAGCCACGCTGGCCGCCCGTAATCAAGACGCTCACAACTTGCTGCAAAAGCAGGCGCGGATCAACACGCAACTGCAAGAGGGCTTGATGGGC ACGCGGATGGTGCCGTTTGAACGGGTGTTGCCGCGCCTCAAACGCGTGGTGCGCCAAGTGGCCAGCGAGCTGGGCAAGCAGGTGGAGTTCAGCGTGATCA ATGCTGAAGCTGAAATCGACCGTAACGTCCTGGAGCGCATGGTTGCCCCGTTGGAGCACATGCTGCGTAACGCAGTCGATCATGGCCTGGAACCGAGCGA TGTGCGCCATGCCAGCGGCAAGCCCGAGCAAGGGCTGATCACGCTGGAGTTGTCCAACGAAGGCGGCGACGTGGTGTTTGATATCCGCGATGACGGCGCG GGTGTTCCGCTTGAAGCGGTGCGGCGCAAGGCGATTCATCGCGGTTTGCTGGACCCGCACAACAGCGTCAGCGACCGCGACGTGTTGCAATTCATCTTGC AGCCGGGGTTTTCTACCGCTGAAAAAATTACCCAGATTTCCGGGCGTGGCGTGGGCATGGACGTGGTCCATGAAGAAGTGCGGCAGTTGGGCGGCAGCAT GACGCTCGATTCGGTGGCAGGGCAGGGTGTGCATTTTCAGATCCGGTTGCCGTTTAGCGTGTCGCTCAACCGCGCACTGATGGTGCAGTGCGCGGATGAG CAATACGCCATTGCGATCAATACCGTCGAAGGCATCGTGCGCGTCATGCCCAACGAGCTGGAAGGCTATTACCAGCTCAACCCGCCGCTGTATCACTACG GCGGCCAAACCTACGAATTGCGCTATTTGGGCGAGTTATTGCAAACCGTGGTCAAGCCTAAACTGGCCGGTGAGCAGCATTCATTGCCGGTGTTGCTGGT GCATTGCCAAGACATGCGCGTGGCGCTGCAAGTGGATGCGCTGGCCGGCTCGCGCGAAATCGTGGTCAAGAGCCTGGGTCCGCAATTTGCCGCTGTGCAA GGGTTGTCGGGGGCCACGATTTTGGGCGATGGGCGTGTGGTGTTGATCCTTGATTTGCTCGCCTACATTCGTGCCCATCAAGTGCGTCAACCCTTGCAGC GCGCCCACCATGAAGTCAGCGGCAGCCTTGAATTCATCCCGGCGGTGCGTCCGCCGTTGGTGTTGGTGGTGGACGACTCCGTCACCGTGCGCAAAGTCAC CAGCCGCTTGCTGGAACGTAACGGCATGAACGTCATCACCGCCAAAGACGGGGTTGACGCCATGAGCGTGCTCGAAGAACACACCCCGGACTTGATGCTG CTGGATATTGAAATGCCGCGAATGGACGGCTTTGAAGTTGCCACCCATGTGCGCAACGACCCGCGTCTCAAAGACATGCCCATCATCATGATCACCTCGC GTACCGGGCAAAAGCACCAGAACCGCGCCATGGCCATTGGCGTCAACGACTACTTGGGCAAACCGTATCAAGAGTCTGTGTTGCTGGAGCGCATCGCCTA CTGGAGCCGCTTCCATGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCACCGTGTTGGCAGCCTCACCTGCCTGCTCTTGCCGCTGGCTGACCGCTACTTGCTGTTGCCCAACGTCGCGATTGCCGAGTTGATCGACTACCAGCGC GGCGAACCCAGCAGCGACTCCCCGCCGTGGCACCTGCGCCAGATCACCTGGCGCGACCACCCGTTGCCACTCATCAGCTTTGAAGCGGCATGCGGCAGCC CGCTGCTGATTGGCGAACGGGCGCGCATCGTCATCCTCAACACCTTGAGCGCCAACCCAGCGTTGAAATACATCGCGATGGTGGTTCAAGGCATTCCACG CTCCTACAAACTCGACAGCCAACTGAGCTTTGTCGACGTGCCCCTTTGCCCACTGGAACGTGCCGCTGTGCAAGTCGGCGAGCATGTGGCGAAAATCCCT GATTTGTGGGGCTTGGAGCGGTTGGTGTCGGGGTTGCCCCCAGGTCCCCTCGACGAACGCCGCATTGCCCTTTAAGTTCGCAACCTTGACCCTTATCTCG
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| Amino Acid Sequence |
>histidine kinase
MVDRHDYVALEWVKDEIAGTLKQARVALDSDGQQATPEALAQCLACVHQVHGSLLMVEFYGAALLAEEMEQLVIALQQRRVSQLDEAVRVLQQAFNQLPL YLERVHSARRDWPLVVLPLINDLRTARGESLLSETSLFSPPLQVLAPLDHATLTQRSPADLPAQVRAWRQTLQTSLLGLLREDDVQRQLEQLASVFTQLE ALCQGAPLNALWEIATALVEGMLKGKVGNSPALRSLLRDADKELQRLHTQGIEALNQPASDVLLTSLLFYIAKAERPTPKMLSLKNHYELDEAMPDAAMV DEERARLAGPDRDAMRSVVAALCDELVRVKERLDLFVRSDRTHVSELNSLMAPLRQIADTLAVLGFGQPRKVIIDQLAVVQSLAQGQREPTDAVLMDVAA ALLYVEATLAGMVGTVEPSQREESRLPTTDLMQIHQWVIKEARIVFDEAKDLISDSLAGGFDRQHLQPVPALLTQIRGALAMIPLNRAADLLQACDDYLC EHWLLGTEPVTAQHIDRLADALVSIEYYLERLAQDPGAAGEQVLDRAESSLIALGYAPTERHVPLLEDILSPTEVLVMQDLQALQDPEVMQSLAEVLANP VSALNPPAQHIPASLLPPPVDEARVDEELLDVFLEETDEVLNMLHHALPQWVANPADSAALAELRRGFHTLKGSGRMVRALVLGELAWAVENLLNRVIER KVAPAPAIYQLLEDVLRVLPGLIQAFAEGRQRQCDDVDTLAAQAHHLSKGHPLPLLIEQETLGFDPQLLDIFRQEAHSHLDTLNRFLDHASEQLPLYASD ELQRAVHTLKGSAHMAGVLRMAELAAPLDHLVREYKAHHLALDLDEIELLLEADSLLHRGLKQLDSDPLAEIHGARSLIERTEHLIADRLDVLLNTPGNA VKLTRDPQRIGAFLEQGMDTLFEAEDVLRHWRQQPHERAGLDTLLDQLTALGESAHLLDLQPVDALCEALLDLYGAVEESSLAVSARFFDEAEQAHEALI NMLDQLAAGQDITPQPTRIDALHRLLHEGLAPDATGLIRREGSQTLDITELGAATAHLQAGTLAGEGESMDDEIVAIFLEEAVDILDSAGQALQRWLSEP ESLAPLSSLQRDLHTLKGGARMAGIGPVGDLAQELEHLYEGLLDRRASESPALADLLQRSHAQLALMLEHLQQQQPLREPDQLIDAIRGFRHHPHLAAEL PVAPPDGASGGDTELRDIFLEEAFDILESSGAALTRWQAEPQGTVEVENLLRDLHTLKGGARMVEIAAIGDFAHELETLLEDVSAGVLPPGADLFALLQN CHDRAAQMLDALRSGQPVQSPQDLIERIRDTERNARHAVQAPASTKVEPQGAAMTEGERTGLDMVKVPAELLEDMVNLSGETSIIRGRLEQQINDGQVAL NEMQTTLERMRDQLRRLDTETQGQRHSRGHTESDGLAYDEFDPLEMDRHSQLQQLSRALFESASDLLDLKATLAARNQDAHNLLQKQARINTQLQEGLMG TRMVPFERVLPRLKRVVRQVASELGKQVEFSVINAEAEIDRNVLERMVAPLEHMLRNAVDHGLEPSDVRHASGKPEQGLITLELSNEGGDVVFDIRDDGA GVPLEAVRRKAIHRGLLDPHNSVSDRDVLQFILQPGFSTAEKITQISGRGVGMDVVHEEVRQLGGSMTLDSVAGQGVHFQIRLPFSVSLNRALMVQCADE QYAIAINTVEGIVRVMPNELEGYYQLNPPLYHYGGQTYELRYLGELLQTVVKPKLAGEQHSLPVLLVHCQDMRVALQVDALAGSREIVVKSLGPQFAAVQ GLSGATILGDGRVVLILDLLAYIRAHQVRQPLQRAHHEVSGSLEFIPAVRPPLVLVVDDSVTVRKVTSRLLERNGMNVITAKDGVDAMSVLEEHTPDLML LDIEMPRMDGFEVATHVRNDPRLKDMPIIMITSRTGQKHQNRAMAIGVNDYLGKPYQESVLLERIAYWSRFHA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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