Pseudomonas sp. DSM 28140, TU87_RS16495
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. DSM 28140 7_255600_33.9873, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCCATGACGGACGCCGAGATAGAGGTCTTGCTGCAAGATCCGGGGATTATCCGCAACCGCCTGAAAGTGGTGGGCGCCAGGCGCAATGCCCACGCCTGGC TGGCGCTGGACAACCCGGTGGAGTTTTTGTGGTCGTTCGTGGGCGGCCAGCCGAAGATCAATCACTTCACTGAACGCCATGAATTCCCGGCGGTTACACC CCAGGCTGAAGCCATGAGCAAGGGCCTCAAAAAAGCCGGATTTACCTTCGTTGGCCCGACTATTTGTTACGCGTTCATGCAGGCCAGCGGCATGGTCATG GACCACGCCACCACCTGTGACCGCTACGCGCAGCTGGTCAACGGCGGTTAGAATACGGGCCAATTGCATTGACTGTAGTCGCTGGCGAAGGCTGCGATAA GGCCATAAGGGCCTTCAATAGCGAGGTTGTTGGGCAACTGATCGCCACCTCGTACTTCGCCTGCGACTACAAAGCCGTTTGTTTTGAATGGGAAAACCCT
|
|
| DNA Sequence for Gene |
>TU87_RS16495
GTGGAAAAGTTTAAAGGCGCCCTGCTGGTCGGGGCTTTGCGGTTATTTGCCATGCTCCCGTGGGGCGCGGTGCAACGCGTGGGCTCGGCCATTGGCTGGC TGATGTGGAAACTGCCGAATCGCTCACGCGATGTGGTGCGCATCAATCTGGCCAAATGCTTCCCTGAAATGGACCCGGTTGCCCGTGAGCAACTGGTCGG CCAAAGCCTCAAAGACATCGGCAAAAGCCTGACCGAAAGCGCCTGCGCCTGGATCTGGCCGGCTCAACGCTCGATCGATCTGGTGCGTGAGGTTGAAGGC CTGGACGTGCTCAAGGATGCTTTGGCGTCAGGCAAGGGCGTGGTTGGCATCACCAGCCACTTGGGCAACTGGGAAGTGCTCAACCATTTCTATTGCAGCC AGTGCAAGCCGATCATTTTCTATCGCCCGCCAAAACTCAAAGCGGTAGACGAGTTGCTGCAAAAGCAGCGTGTTCAGTTGGGCAACCGCGTCGCGGCATC GACCAAAGAAGGCATCCTGAGTGTCATCAAAGAGGTGCGCAAAGGTGGTCAGGTGGGTATTCCGGCAGACCCGGAGCCAGCAGAGTCGGCGGGTATTTTT GTACCGTTCCTGGGCACCATGGCCCTGACCAGCAAATTTGTACCGAACATGCTGGCGGGCGGTAAAGCGGTCGGGGTGTTCCTGCACGCGCTGCGCCTGC CGGATGGCTCGGGCTTCAAGGTGATTCTGCAAGCCGCGCCTGAAGAAATGTACAGCACCGACACGGCCACTTCGTGCGCGGCCATGAGCAAGGTGGTCGA AAAATATGTGCGCGCTTACCCCAGCCAGTACATGTGGAGCATGAAGCGCTTCAAAAAGCGTCCGCCAGGCGAGGCGCGCTGGTACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TAACCGTGCAGGCTGCGATCTTTCCAGATCAGAACATCGCAGCCTGCGTTAACGCCGACCGGACCGTGTCAGGGCTGCTGTTTATCCAGCTTCTTCAAAA ACACGCTCATTTCTTTTTCGGCCTGTTTGTCGCCATGGGCCTGCGCGGCCGCAGTGCCCTGCTCCCATGCGGTGTGCGCTGCCGCTCGGTCCCCTGCCGC TAAATACGCCTTGCCCAATAACTTCCAGGCCGCCGAGTACTTGGGATCAAAACCTACACAGCGTTGCAGATGCTCTGCCGCCTTGAGGTAATCCCCAAGG TCGAGATACCCCTTGCCCAGGCCAAAGCGCAGCAGTGAGTTATCCACACCCTTGGCCAGCATTTTTTCCAGTGATTCCAGCATCCGTCCGGCTCCTTAGA AAAAGCTCAGTCCTACATGGAACAGCTTCTCAACGTCGCGAATATGCTTTTTATCCACCAGGAACAAAATCACATGGTCGCCCGCATTGATGACGGTGGC
|
|
| Amino Acid Sequence |
>lipid A biosynthesis lauroyl acyltransferase
MEKFKGALLVGALRLFAMLPWGAVQRVGSAIGWLMWKLPNRSRDVVRINLAKCFPEMDPVAREQLVGQSLKDIGKSLTESACAWIWPAQRSIDLVREVEG LDVLKDALASGKGVVGITSHLGNWEVLNHFYCSQCKPIIFYRPPKLKAVDELLQKQRVQLGNRVAASTKEGILSVIKEVRKGGQVGIPADPEPAESAGIF VPFLGTMALTSKFVPNMLAGGKAVGVFLHALRLPDGSGFKVILQAAPEEMYSTDTATSCAAMSKVVEKYVRAYPSQYMWSMKRFKKRPPGEARWY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|