Pseudomonas sp. DSM 28140, TU87_RS12845

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00072
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00388
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00388
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF47384 Homodimeric domain of signal transducing histidine kinase IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily 402 482 2.16E-16
Coils Coil Coil - - 396 416 -
FunFam G3DSA:3.30.565.10:FF:000010 Sensor histidine kinase RcsC - - 480 645 2.1E-44
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 663 779 7.97E-16
SMART SM00388 HisKA_10 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 416 481 1.6E-15
Gene3D G3DSA:1.10.287.130 - - - 382 479 1.2E-19
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 528 643 3.5E-20
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 664 775 1.5E-9
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 470 642 6.29E-34
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 587 597 6.1E-13
Gene3D G3DSA:2.60.40.2380 - - - 29 176 7.9E-38
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 569 583 6.1E-13
Pfam PF07695 7TM diverse intracellular signalling IPR011623 7TM-DISM receptor, extracellular domain, type 1 182 384 1.0E-54
CDD cd17546 REC_hyHK_CKI1_RcsC-like - - 664 775 3.76538E-16
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 604 622 6.1E-13
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 480 645 5.1E-40
Pfam PF00512 His Kinase A (phospho-acceptor) domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 417 481 5.3E-12
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 628 641 6.1E-13
Pfam PF07696 7TMR-DISM extracellular 2 IPR011622 7TM-DISM receptor, extracellular domain, type 2 32 169 3.8E-35
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 528 644 5.5E-25
CDD cd16922 HATPase_EvgS-ArcB-TorS-like - - 533 642 3.29087E-40
PANTHER PTHR45339 HYBRID SIGNAL TRANSDUCTION HISTIDINE KINASE J - - 361 779 8.1E-86
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 662 775 9.7E-5
CDD cd00082 HisKA IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 414 476 5.78747E-13
Gene3D G3DSA:3.40.50.2300 - - - 656 781 1.4E-16

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.