Pseudomonas sp. DSM 28140, TU87_RS08610
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. DSM 28140 3_554562_32.5032, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GATCCGGAAGGCAAAATGAACCTCTCGCTGGCCGACATTGACGGCGGTTTGCTGTTGGTGTCGCAGTTCACCCTGGCCGCCGACACCAAAAGTGGCCTGC GCCCAAGCTTCTCCACCGCCGCCCCGCCCGAGGTCGCCCACGCTTTGTTCAACCACCTGTTGAAAGAGGCCAATCGGCTGCATCCACAGGTCGCGTCAGG GCGATTTGGTGCCGATATGCAGGTGCATTTGGTCAACGATGGCCCCGTTACATTTTTGTTACAAACCTAAAACCCCGAAAATCGGTGTTTTCGTCAGAAA ACAGGGGGTTTTAAGCATAAATACTTGCTGACAGTAGATGCGTTGTCACGCGGGCTACTAGATAATCCCGCGCTACGCAGAGACTAATCCGACGCGCCTG GGGAATCATTCATTCCTTTGACGGTCGGAACAGTGCTCGCCAACCCGGCATTTAAGCGCTGGCGGTTGGTTTCATCATCTGTATTCGGCGAGGTTTGCTC
|
|
| DNA Sequence for Gene |
>TU87_RS08610
GTGATTGTTAGTCCATTTAATGCACCAAAAAAGTCTGCCAAGCGGTTACGCAACGCACTGGTGACGGGCTCTGCGCTCTTTTGCTTGTTCGGTGCGGGTC AACTGTGGGCATTCAGTCTGGATGACGTGGCGGCAGAGGCTAAAACCCTCGTCGAGCATAAGTACCAAGCACCGCGCAGCAATTTGCCTAACGAATTTCG CGACATGAAGTTTGCGGACTATCAAAAAATTCGTTTCCGCAACGAGAAAGTGCAGTGGGCTGACGACAAAACCCCCTTCAAACTGTCGTTCTATCACCAG GGCATGCACTTCGACACGCCCGTGAAGATCAACGAAGTCACTGCCACCAAGGTGGAAGAGATCAAGTACGACGCCAGTCGTTTCGATTTCGGCGACGTTA AATTTGACCCTAAAGCCACCGAAAACCTCGGTTGGGCGGGTTTCCGCGTGCTGTATCCGCTGAACAAAGCAGATAAGCAGGACGAAGTCATGACCATGCT GGGCGCGAGTTATTTCCGCGTTGTCGGTAAGGATCAAGCTTACGGTCTGTCGGCGCGTGGTTTGGCCATCGATACAGCCCTGCCTTCTGGCGAAGAATTC CCGCGTTTCACCGAGTTTTGGATCGAGCGCCCGAAAGCCGGTGACAAGCACCTGGTTATTTTCGCGCTGCTGGACTCGCCGCGTGCCACGGGCGCTTACC GCTTTACGCTGCGCCCAGGTGTCGACACCGTGGTCGACGTCAAAGCGCAAATGTTCCTGCGCGACAAAGTCGGCAAGTTGGGCATCGCTCCGCTGACCAG CATGTACCTGTTCGGCGCCAATCAGCCTTCCAAAGTGCTCAACTACCGTCGCGAACTGCACGATTCGTCGGGTCTGGCGATCCATGCGGGTAACGGTGAG TGGATTTGGCGTCCGCTGAACAATCCGAAGCATTTGTCGGTGAGCAACTTCTCGGTTGAAAACCCGCTGGGCTTTGGCCTGTTGCAACGCGGCCGTGACT TCAGCCACTACGAAGACCTCGATGACAACTACCACAAGCGCCCAAGCGCGTGGATCGAGCCACAAGGTGACTGGGGCAAAGGCACGGTTGATCTGGTAGA GATTCCGACCGCCGATGAAACCAACGACAACATCGTTGCCTTCTGGAGCCCGGACACTCAGCCTGAGCCGCTCAAGCCTTTCGACTTCGCGTATCGCCTG CACTGGACGATGGACGAAGCCGCTTTGCACCCTAAAGACAGCGCCTGGGCTCAGCAAACACTGCGTTCGACCGGCGACGTCAAGCAATCCAACCTGATCC GTCAACCGGACGGCAGCGTGGCTTACCTGATCGACTTCGAGGGCCCGTCCCTTGAGAAGTTGCCAGCAGACGCTGCCATTCGCAGCCAGGTCAGCGTGGG TGATAACGCCGAGCTGGTAGAAAACAACCTGCGCCACAACCCGGAAACGAAGGGCTGGCGCTTGACCCTGCGCTTGAAGGTCAAAGACCCAAGCAAGTCG ACCGAGCTGCGTGCAGCACTGGTCAAAGATGAAGACCCGGCGCCTGTTGCTCCGTTGACCAAGGCTGAAAAAGCAGCGGCCAAGGCGCAGGAAAAGAAAG AGCAGCACAAAGCCAAGGACGCCAAAGCGCCTGCGGCCGAGGCGGCTCCAGCCACCCCAGCGCCAGTCAAGACTGAAAAAGTCCTGACCGAGACCTGGAG CTACCAGTTGCCAGCCGATGAGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TGCTCACGCACAGCCAGTCTCGCTCAGCGAGTATCTGGCGCATCTGCCGCTGAGCGACGAGCAGCGCGCCGAACTGGCGAGCTGCACCTCGTTTGAGCAG CTGCACGAGCGCCTTTCGGCCCGCGCCGACGTGAACACCGCCGAGGCCGCTCAGGCGTCGGTGGGCACACGGCTGACACTCGGCTCGGCCGAGGCGTTGG AGGACGCAGAAATGCTGGCCGTCGACGCCAGTGGCCGGGTCATGCTCAAGGCCACGCCGCCGATTCGCCGCACCAAGGTGGTGCCTGAACCGTGGCGTAC CAACATTCTGGTACGCGGCTGGCGGCGCCTGACCGGGCGCATCAACCCGCCGGCTCCGCCTAAAGATGAACGCGTTCTGCCCAAGGCGCGCTGGCGCACC GTGGGTTCGATTCGTCGTTACATTCTGTTGGTTTTGATGCTGGGCCAAACCATCGTCGCGGGCTGGTACATGAAGGGCATCATGCCGTACCAGGGCTGGT
|
|
| Amino Acid Sequence |
>glucan biosynthesis protein G
MIVSPFNAPKKSAKRLRNALVTGSALFCLFGAGQLWAFSLDDVAAEAKTLVEHKYQAPRSNLPNEFRDMKFADYQKIRFRNEKVQWADDKTPFKLSFYHQ GMHFDTPVKINEVTATKVEEIKYDASRFDFGDVKFDPKATENLGWAGFRVLYPLNKADKQDEVMTMLGASYFRVVGKDQAYGLSARGLAIDTALPSGEEF PRFTEFWIERPKAGDKHLVIFALLDSPRATGAYRFTLRPGVDTVVDVKAQMFLRDKVGKLGIAPLTSMYLFGANQPSKVLNYRRELHDSSGLAIHAGNGE WIWRPLNNPKHLSVSNFSVENPLGFGLLQRGRDFSHYEDLDDNYHKRPSAWIEPQGDWGKGTVDLVEIPTADETNDNIVAFWSPDTQPEPLKPFDFAYRL HWTMDEAALHPKDSAWAQQTLRSTGDVKQSNLIRQPDGSVAYLIDFEGPSLEKLPADAAIRSQVSVGDNAELVENNLRHNPETKGWRLTLRLKVKDPSKS TELRAALVKDEDPAPVAPLTKAEKAAAKAQEKKEQHKAKDAKAPAAEAAPATPAPVKTEKVLTETWSYQLPADE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|