Pseudomonas sp. DSM 28140, TU87_RS06090

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:3.55.50.10	-	-	-	95	188	2.9E-88
Pfam	PF04717	Type VI secretion system/phage-baseplate injector OB domain	IPR006531	Gp5/Type VI secretion system Vgr protein, OB-fold domain	392	458	6.9E-15
NCBIfam	TIGR03361	JCVI: type VI secretion system tip protein TssI/VgrG N-terminal domain	IPR017847	Type VI secretion system, RhsGE-associated Vgr family subset	10	528	0.0
Pfam	PF05954	Phage tail baseplate hub (GPD)	-	-	29	326	1.3E-77
SUPERFAMILY	SSF69279	Phage tail proteins	-	-	10	184	7.23E-57
FunFam	G3DSA:3.55.50.10:FF:000001	Actin cross-linking toxin VgrG1	-	-	95	188	6.9E-36
Gene3D	G3DSA:2.30.110.50	-	-	-	18	327	2.9E-88
SUPERFAMILY	SSF69279	Phage tail proteins	-	-	189	370	1.5E-40
SUPERFAMILY	SSF69255	gp5 N-terminal domain-like	-	-	370	458	2.17E-32
SUPERFAMILY	SSF69349	Phage fibre proteins	-	-	448	612	2.9E-32
NCBIfam	TIGR01646	JCVI: type VI secretion system tip protein VgrG	IPR006533	Type VI secretion system, RhsGE-associated Vgr protein	22	510	2.6E-124
Gene3D	G3DSA:2.40.50.230	-	IPR037026	Vgr protein, OB-fold domain superfamily	361	461	1.2E-40
Gene3D	G3DSA:4.10.220.110	-	-	-	221	283	2.9E-88
PANTHER	PTHR32305	-	-	-	68	607	2.6E-78

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.