Pseudomonas sp. DSM 28140, TU87_RS05695
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. DSM 28140 2_733184_32.1465, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AATCGTAAGGACTAGCAGCACCACTCATGCCAAAAATCCCTTATATCCCCCTCACCGCCATCGACTGCAACATCCCCTATGTTGATCGACCGCAACGCAC CCCTCGACGTATTACATGCCAATGCCACCGCCCGTGTGCTGGCCGTCACACAACGGATGGAAACCTTTGCCAACCGTGAAGTGCAAGAGGCAGACGCCAT CGACCTCAAACACCTGGCCACCACGGCAGCGGCGTGACTGCGTGATGGCTGCGACGTGCTTAACGTGCTGGGCTGGCGCCTGCAACCCACCTGAACCGGC TGTGTACCAAGCCGCTCGCCGCCACATGAGGTGGCGGCCTGTCGGTAGAACGCCCTGATGGTGTCGCCTTGGCGATTACAGATGTAATCCTATGTAAGTT TTTTACTTGATCCATGTGAGAGCGGTCTCAAACCTCGTGCGAATCATCTTGCACCCTCGGCTATACTCCCTTTCATTTGAACGGCACCCGAGGATCGACT
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| DNA Sequence for Gene |
>TU87_RS05695
GTGAAGAACTGGACGTTACGCCAACGCATCTTGGCGAGCTTTGCCGTAATCATTGCCATCATGCTGTTGATGATCGTCGCAGCGTATTCACGCCTGGTCT CGATTGAATCCAGTGAAGACAAAGTGCGCACCGACTCCATTCCCGGTTTGTATTACAGCTCCATGATCCGCAGTGCCTGGGTCGACAGTTACGTTCAGAC CTTGCACCTGATGAATGATGTAACCGGTCACCCGCTCACCAAAGAGGAAAAAGACCTCTACGCGTCCTATGAAGCCCGTCTGGAAAAAGAACTGGCCGGT TATCGCTCGACCATCAGCGACGGCACGGATGACTCCGAATATGAAGCGTTTTTAGTGCGCCATAAAGCCTACGACGCCTCGCTGGACACGGTGGTCGCGC TGTTCGAAAAGAACGACATGGATCAAGCTCGTCGCCTGCTGGTAGAGCAACTGACGCCCGCGTGGAACGCAGGCCGTCAGCAACTCAATAAAATGATTGA AGACAACCAGAACGCGGCCATTCTTGCCAGCAACAACATTTCTGACGCGGTGTTGGCGGCCAAGGCCAGCATGCTGGTGTCACTGCTGATTGCCGTGATC GCGGCCAGTGTGTGCGGCTTCCTGTTGCTGCGCGCGATTATGTCGCCGATGCAGCGCATTGTGTCGATCCTCGACGTGATGCGTTCCGGTGACTTGAGCA AGCGCCTGGACCTGGAGCGTAAAGACGAGTTCGGCGCTGTCGAAACCGGCTTCAACGACATGATGGCCGAGTTGACGGCGCTGGTGTCTCAGGCCCAGCG CTCCTCGGTGCAGGTCACGACGTCGGTCACTGAAATTGCCGCCACCTCCAAGCAGCAACAGGCCACCGCCACTGAAACCGCCGCCACCACCACTGAAATC GGCGCCACGTCGCGCGAAATTGCGGCCACCTCGCGTGATCTGGTACGCACCATGACCGAAGTCACGTCGGCGGCCGACCAAGCCTCGATTTTGGCCGGTT CCGGGCAACAGGGTCTGGCGCGGATGGAAGACACCATGCATCAGGTCATGGGGGCGGCCGATCTGGTGAACGCCAAGCTGGCGATTCTGAACGAGAAGGC CGGCAATATTAATCAGGTGGTGGTGACCATCGTTAAAGTGGCCGACCAAACCAACCTGCTGTCGCTCAACGCTGCAATTGAGGCCGAGAAAGCCGGTGAA TACGGACGCGGCTTTGCCGTGGTGGCCACCGAAGTGCGCCGCTTGGCTGACCAGACGGCCGTGGCCACGTATGACATTGAGCAAATGGTGCGTGAGATTC AGTCCGCCGTGTCGGCGGGTGTGATGGGCATGGACAAGTTCTCCGAAGAGGTGCGCCGCGGCATGTCCGAGGTGCAGCAGGTGGGCGAGCAGTTGTCGCA GATCATTCATCAGGTGCAGGCGCTCGCGCCTCGCGTGTTGATGGTCAACGAAGGCATGCAGGCACAAGCCACCGGCGCCGAGCAGATTAACCATGCGCTG GTGCAGTTAGGCGATGCCAGCAGCCAGACCGTTGAGTCGTTGCGCCAGGCCAGCTTTGCCATTGACGAGCTGAGCCAGGTGGCGGTCGGGCTGCGCAGCG GCGTTTCGCGATTCAAAGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGAGCGAACCTCTCGCCCCGCGCGAAGCCGCCAAGGCGTCGAAAAACAGCCTTTTCCTGGTGTTTTATATTGGCGCCGAGCGCTATGCCTTACAGGCTAT CGACGTGGTTGAAGTGTTGCCGCGTTTGCCGCTTAAACCCATCGCCCATGCGCCCGCGTGGGTGGCAGGGGTGTTGGCGCATCGTGGCCAGATGGTGCCA GTGATTGATGTGAGTGCCATGACCTTCGGCCAACCGGCGGTCGAACGCACCAGTACCCGCCTGGTGTTGGTCAATTATCAGGGCCGTTTGTTGGGGCTGG TGCTGGAGCAGGCCAACGAGATGTTGCGCTGCAACCCGGCGGACTTTCAGCCCTATGGGCTGGATAACCGCGAGGCACCTTATTTGGGGCCGGTGCGCAA AGACGCACAGGGGTTGTTGCAGTGGATTCGCGTCAACGATCTGCTAACGCCAGCAGTACGCGGGTTGTTGTTCACTGACGCGGACCTCGATCTGTCTGGG
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| Amino Acid Sequence |
>chemotaxis protein
MKNWTLRQRILASFAVIIAIMLLMIVAAYSRLVSIESSEDKVRTDSIPGLYYSSMIRSAWVDSYVQTLHLMNDVTGHPLTKEEKDLYASYEARLEKELAG YRSTISDGTDDSEYEAFLVRHKAYDASLDTVVALFEKNDMDQARRLLVEQLTPAWNAGRQQLNKMIEDNQNAAILASNNISDAVLAAKASMLVSLLIAVI AASVCGFLLLRAIMSPMQRIVSILDVMRSGDLSKRLDLERKDEFGAVETGFNDMMAELTALVSQAQRSSVQVTTSVTEIAATSKQQQATATETAATTTEI GATSREIAATSRDLVRTMTEVTSAADQASILAGSGQQGLARMEDTMHQVMGAADLVNAKLAILNEKAGNINQVVVTIVKVADQTNLLSLNAAIEAEKAGE YGRGFAVVATEVRRLADQTAVATYDIEQMVREIQSAVSAGVMGMDKFSEEVRRGMSEVQQVGEQLSQIIHQVQALAPRVLMVNEGMQAQATGAEQINHAL VQLGDASSQTVESLRQASFAIDELSQVAVGLRSGVSRFKV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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