Pseudomonas sp. DSM 28140, TU87_RS04780
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. DSM 28140 2_733184_32.1465, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGAACGTCTGTGCGGCCTTAAAAGCCGTACCTTCCTCGCCGAACTGATGCCGCATTACCCGATTTATGTACCGCTGCTGCCCGATACGGCTCAAGAAGC AATGGGGCAAGTGCATCCGCGTGCGCAGATCACCTTCGACATCCTGATGCGCGAAGGCTTTGAAACCGATCATTACATCGACATTTTCGACGGCGGGCCG ACCCTGCATGCGCGGGTGTCGGGCATCCGCTCAATCGCTCAAAGCCGGGTAGTACCGGTCAAAATCGGCGAGCTGAGCAAGGGCGGCGGTCGTCAGTACC TGGTGGCCAACGCCCAGCTTCAGGATTACCGGGCGGTGTTGCTTGAGCTTGATTGGGCACCGGGCAAACCGGTCACGCTGGATCTGCAAGCGGCCGAAGC ACTGGGCGTGGGTGAAGGTGCCAGCGTGCGAGTGGTTGCGGTTTAACGCCTTTGAGCGAGTGTCGCGAGGTTCGTCAGCGAACCCGTTTGAGGAGATAGC
|
|
| DNA Sequence for Gene |
>TU87_RS04780
ATGATCGTTCGTCCTGTACGCAACAGCGATTTACCGGCCCTGATTGAACTGGCCCGCAGCACCGGCACCGGCCTGACCACCTTGCCGGCCAACGAAGAAC GCTTACTGCACCGTGTGACCTGGGCTGAGAAAACCTTCCGGGGCGAAGCGGAGCGCGGCGATGCCGATTACTTGTTTGTACTGGAAAACGACGACGGTAA AGTCGTCGGTATTTCTGCCATTGCTGGCGCCGTGGGTTTGCGCGAGCCGTGGTACAACTTCCGGGTCGGTTTGACCGTCAGCGCTTCGCAAGAACTGAAT ATTTACCGCGAAATTCCGACCCTGTTTTTGGCTAACGATCTGACAGGTAATTCAGAGTTGTGCTCGTTGTTCCTGGGCGCCGACCACCGTACTGGCCTCA ATGGCCGGATGCTGGCCAAGGCGCGGATGCTGTTCATCGCAGAATTCCCTGAGCTGTTCGGGAACAAAATCATTGCTGAAATGCGTGGCATGTCTGACGA AGCGGGACGCTCGCCGTTCTGGGAAAGCCTGGGGCGGCACTTCTTCAAGATGGAGTTCAGCCAGGCCGACTACCTGACCGGTGTGGGCAATAAAGCCTTT ATTGCCGAGTTGATGCCCAAGTTTCCGGTTTACACCTGTTTCCTGTCTGAAGATGCGCGTGCGGTGATCGGCCAGGTGCACACTCACACCGAGCCTGCGC TGAACATGCTCAAAAGCGAAGGCTTCAGCTATCAGGGCTACGTCGACATTTTCGATGCCGGCCCGGCTGTGGAGTGTGAAACCAGCAAGATCCGTGCAGT GCGCGAGAGCGAAGCGCTGGTGTTGGCCATCGGCACTCCGGGCGACGACGCCACGCCTTACCTGATTCACAACCGCAAGCGCGAGGACTGCCGTATCACG GCGGCACCAGCACGTCTGGCGGCGGGCACCTTGGTGGTTGATCCACAGACCGCCAAGCGCTTGCAATTGAGCGCGGGCGATCAAGTGCGCGCCGTCACCT TGTCTGCCCAGCCAGTGGCCCCACGGGAGTCGAAATAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TGAGCACGTTGTACATCGCAGGCGCCTGGCAAAACGGCCTGGGCGAAGCCTTTGAATCGCTTAACCCGGTCACTCAGCAGGTGCTGTGGAGAGGCAATGG CGCAAACGCTGAACAGGTGGATGGCGCGGTGAAGGCTGCGCGAGAGGCATTCCCGGCATGGGCCACGCGTTCATTTGAAGAACGCTTGAGTGTGCTGGAG GCGTTCGCGGCCAGCCTCAAAACCCACGCCGACGAACTGGCCCACTGCATCGGTGAGGAGACCGGTAAGCCGCTGTGGGAGTCGGCGACTGAAGTCACCA GCATGATCAATAAAGTGGCCATTTCGGTGCAAAGCTACCGCGAACGCACCGGAGAAAAGAGCGGCCCGCTGGGCGACGCCACCGCGGTGTTGCGCCACAA ACCTCACGGTGTGGTGGCGGTATTTGGTCCGTATAACTTTCCGGGTCACCTGCCCAACGGCCATATCGTCCCGGCCTTGCTGGCCGGTAACAGCGTAGTG
|
|
| Amino Acid Sequence |
>arginine N-succinyltransferase
MIVRPVRNSDLPALIELARSTGTGLTTLPANEERLLHRVTWAEKTFRGEAERGDADYLFVLENDDGKVVGISAIAGAVGLREPWYNFRVGLTVSASQELN IYREIPTLFLANDLTGNSELCSLFLGADHRTGLNGRMLAKARMLFIAEFPELFGNKIIAEMRGMSDEAGRSPFWESLGRHFFKMEFSQADYLTGVGNKAF IAELMPKFPVYTCFLSEDARAVIGQVHTHTEPALNMLKSEGFSYQGYVDIFDAGPAVECETSKIRAVRESEALVLAIGTPGDDATPYLIHNRKREDCRIT AAPARLAAGTLVVDPQTAKRLQLSAGDQVRAVTLSAQPVAPRESK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|