Pseudomonas sp. DSM 28140, TU87_RS22365
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. DSM 28140 20_28453_35.0561, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTCCAATGTGAACTACGTCAAGAAGGTGGTGTTTCCGCTCGAAATACTGCCCTTCGTCACGTTGTTATCGGCGCTGTTTCATATGGGTGTCAGCTTGGTG GTGTGGTTGCTGGCCTATGTGATTTTGATTGGGCTGCCTCATCTGACGGTGTTTTATCTGCCCCTCATCCTGCTGCCGCTTGCGTTGTTGATTATGGGCG TGAGCTGGGCGCTGGCATCGCTTGGTGTGTACCTGCGGGATGTCTCGCAGCTCATTGGCGTGGTCACGATGTCGCTAATGTTTTTAAGTCCGATTTTTTA TCCGGCTACTGCGCTGCCGGAATCGTACCGTTACCTGCTCTATCTGAATCCGCTCACTACCGTCATTGAGCAGGCCAGGGCGGTACTTTACTTTGGAACG TCGCCAGACTTTGCCCTGTTGGCGATTTTCTGGGCGGCTACATGCCTTGTTGCCTGGTTGGGTTTTGCCTGGTTCCAGAAGACACGCAAGGGGTTTGCTG
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| DNA Sequence for Gene |
>TU87_RS22365
ATGTCCTCTGAAGTTGCCATCAAGGTTGAAAGCCTGAGCAAGTGCTATCACATCTACGATCAGCCTCGTGATCGCCTCAAGCAGTTTGTTCTCCCTCACG TTCAGCGTGTGCTAGGCGCACGTTCGCGCCAGTACTACCGTGAGTTCTGGGCGCTGAGAGGCGTGAGTTTCGAGGTGAGAAAAGGAGAGACGGTCGGAAT AGTCGGCCGCAATGGCAGTGGCAAGTCGACTCTGCTGCAAATGATCTGCGGCACGCTCAATCCCACTGACGGCAGTATTCAAACTCAGGGTCGAGTGGCT GCGTTGCTGGAGTTGGGGGCGGGCTTCAATCCGGAGTTTACCGGGCGTGAGAACGTCTATTTGAACGCGGCAATATTGGGCCTCAGCAGAGAGGAAACCG ATCGGCGCTTTGACGACATCGCGGCTTTTGCCGAGATCGGAGCGTTCATCGAACAACCGGTCAGAAGCTACTCAAGCGGGATGGTTGTGCGGTTGGCGTT TGCGGTGGCTATTAACGTTGATCCGGACATTCTTATCGTTGACGAGGCGCTCTCTGTTGGTGACGAGTTGTTCCAGCGCAAATGTTTCTCAAGGATAGAG AGCATACGAAACTCGGGGGCGACGATTCTCTTCGTTTCTCACTCGGCGGCAACGGTAGTGGGTTTATGTGATCGCGCTATTCTGCTCGATTCTGGAGAGT TGCTGACGGTCGGCGAACCGAAGCGAATTGTTGGCGGCTACCAGAAACTCCTTTACGCGCCAGCGGCTACGCGGGAGGAAGTGCGTGAGGCCATGCGTGC CAGTTGCTATGAGCCGAGTGGTGCCGAGCCTGAGGGCGATGCGCTGGTCGTGACGGGTAGCGCATCTGTCAGTGAGCGCACCGACGTAGATCAAGAGTCT TTTGATCCTGATTTCGTACCGCAAAGTACGATCATATTCGAGCCCCGTGGGGCGTTGATCGGCGATACCCGAATCTTTACTCATGATGGCGTCCAGGTAA ATGGGCTGGTGCGAGGGCGCACTTACTATTTCCATTATGACGTGAGCTTTGATCGCATTGTTACCAATGTCCGTTTTGGGATGTCGATCCGGTCGTCCAG CGGAATGCCGTTGGGAGGCGGGCTGTCAGCCTCGAGCCCTTCTGAAGCGATTCTGGTGGTTGAGCCGGGCACCCGCTTCCTGGTCAAGTTCTCATTTAAA TGTCTTTTGAATACCGGTGTTTTTTTCCTGAATGCCGGTGTGTTCGGTTGCGATGAATCGAAGGAGGAAGTGGTGCTGCATCGGAAGGCGGATATTCTCG CGTTCCGAGTACTGCCTGTCGTCGACAATCGAGCCACGGAATTGATCGATTTTGGCTTTGAATGTTCGGTGGAAATGAATGCATAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTTGTTTGATGGATTGCTGGTTTCATGCCCGAACGACGGTGGACTCTTCCTGGTTCATGGGGGTAAGGCGAGCCGCCTGGACTCTTTGTCTTGCACCGGC GTAGATGTGAGCGGAGATTCCGTCCTGCGTGGTCTGCAGTCCACCGGATTGGCGCTGACAGGCAAGCTCAATTGGTCGCGCACCGGTGACGTGACGTTGT TCGATGATGTGCACGACGTGCTGCTTGACGGTGAGCTGTGCTACGTCGTTGGTACCACCGGAAACGAAGTGGTTTGCTTCAATGAGGCGGGCACCGAGAT GGGGCGTTGGGCGTTTTCGCAACAACCAGACTCTTGGCATCTGAACTGTTTGGCCCGTTGGAAGGAATCAATCGTCTTTTCCGCTTTCGGTATGGCCGAA ACGACCCGGGGCTACAAAGGCAACACCCAGGGTGCCGGGTTTGTTCAGGACCTGTTTTCGGGACAAAAGTATATTGAGGGGTTGTCACAGCCCCACAGCC
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| Amino Acid Sequence |
>ABC transporter ATP-binding protein
MSSEVAIKVESLSKCYHIYDQPRDRLKQFVLPHVQRVLGARSRQYYREFWALRGVSFEVRKGETVGIVGRNGSGKSTLLQMICGTLNPTDGSIQTQGRVA ALLELGAGFNPEFTGRENVYLNAAILGLSREETDRRFDDIAAFAEIGAFIEQPVRSYSSGMVVRLAFAVAINVDPDILIVDEALSVGDELFQRKCFSRIE SIRNSGATILFVSHSAATVVGLCDRAILLDSGELLTVGEPKRIVGGYQKLLYAPAATREEVREAMRASCYEPSGAEPEGDALVVTGSASVSERTDVDQES FDPDFVPQSTIIFEPRGALIGDTRIFTHDGVQVNGLVRGRTYYFHYDVSFDRIVTNVRFGMSIRSSSGMPLGGGLSASSPSEAILVVEPGTRFLVKFSFK CLLNTGVFFLNAGVFGCDESKEEVVLHRKADILAFRVLPVVDNRATELIDFGFECSVEMNA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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