Pseudomonas sp. DSM 28140, TU87_RS01920 (zipA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. DSM 28140 1_831734_30.8673, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGAATCCGGCCCCGTTTTGCATGCTCGATGAAGTGGATGCACCGCTGGATGATGCGAACGTCGGGCGCTATGCCCGTCTGGTGAAAGAGATGTCCCAGAC GGTGCAATTCATCTACATCACCCACAACAAAATCGCCATGGAAATGGCCGATCAGTTGATGGGCGTGACGATGCATGAGCCTGGCTGTTCACGTCTGGTC GCGGTTGATGTCGAGGAGGCAATGGCAATGGTCGAAGCTTGAGCTATAAGCAAGTAGGGTCAAAAATTTCTGTTGGTAGGAATTTTCCTTTGCGCTTGAG TGATCTGTCTCGTGCGCATGTGGCTTTGTTGGCATAGCTCAATGCGACAGACGGTGTAAAGTTATCTTTGGTCGTGCTAATTTAGCGTCTAATTTTTTTG TACGTGGGTAAAACGCCATTCAGAACATAGAGTTGGCGCCACGTTTTAAAGGGCTTTAGGCTCTTCTTCATAGAATCATTTTTTAGGGGCAAGGGATTAC
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| DNA Sequence for Gene |
>TU87_RS01920
|zipA
ATGGAAATCGGTCTGCGCGAGTGGCTGATCGTCATCGGCATAGTGGTCATCGCCGGTATTCTTTTTGATGGCTGGCGCCGGATGCGCGGCGGCAAGGGCA AGCTTAAGTTTCGCCTTGACCGCAGCTTTTCCAATGTGCCGGACGAGGAGGAGACCAGCGCCGAGTTGCTGGGCCCTTCACGTGTTCTGGACACCCCGAA CCATAAAGAGCCGCAACTCGATGAGCATGACCTGCCGTCCGTGAGCATGCCGGCGCGTGAGAAGGGTGCCAAGCGCGGCAAGCGGGGTGGCGAGCCAAGC CAGGGTGACTTGAACCTGAACCTCGATCTTGAGGATGACGGCCCGAGCCTGAGTGCCCGTGATGACTTCGCGCCTGAAGCCAAGCCTGCCCGTGGTCGTG CAACTTCCAGCCCCTCCATGTCGGCGGTGGTTGAAGACAAAGAGCCGCAACCCGCAGCCGAAGAAGTGCTGGTCATCAGCGTCATCAGTCGTGATCCGGC GGGCTTCAAAGGCCCGGCGCTGTTGCAGAACATTCTTGAAAGCGGTCTGCGTTTTGGTGAGATGGATATTTTCCACCGCCACGAAAGCATGGCCGGTAAC GGCGAAGTGCTGTTCTCGATGGCTAACGCCGTCAAGCCGGGCGTGTTTGATCTGGACGACATTGATCTGTTCAGTACCCCGGCCGTCAGTTTCTTCCTCG GCTTGCCAGGCCCGCGTCATCCCAAGCAGGCGTTTGATGTGATGGTCGCTGCTGCACGCAAACTGTCGCAGGAGCTTAATGGCGAGCTTAAAGATGATCA GCGCAGCGTGTTGACCGCGCAGACCATCGAACACTACCGTCAGCGCATCGTTGAGTTTGAGCGTCGCGCACTGACCCAAAAGCGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACCTTGTGGGAGTCAGCTTCTTTGCTCCCGCTCAAACGCGAATGAATCAACTCAAGAGCAGCCACGGCTGCTCTTTTGCATTGTGAGAGAACACCCCATG ACTGCCGCCCATACTCGAATCCTGGCGCTGCGCGCTGAACTGGACCAGCACAACTATCGCTATCACGTCCTCGACGAGCCAAGCATCCCGGACGCTGAAT ACGATCGCCTGTTTCGCGAGCTCAAGGCGCTGGAAGCTGAGCATCCGCAGTGGATCACCCCTGATTCACCGACCCAGCGGGTCGGCAGTGCGGCGTTGTC GGCCTTTACGCAAGTGCGACATGAAGTGCCGATGTTGAGTTTGGGTAACGCCTTCGATGAATCGGACATGCGCGAGTTTGACCGGCGCGTGCAAGAAGGG CTGGATTTGCCAGCAGCTGATTTGCTGGGTGGCGGCGCCGAGGTTGAATACAGCTGTGAGCCCAAACTGGACGGCCTGGCGGTGAGCCTGCTTTACCAGG
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| Amino Acid Sequence |
>cell division protein ZipA
MEIGLREWLIVIGIVVIAGILFDGWRRMRGGKGKLKFRLDRSFSNVPDEEETSAELLGPSRVLDTPNHKEPQLDEHDLPSVSMPAREKGAKRGKRGGEPS QGDLNLNLDLEDDGPSLSARDDFAPEAKPARGRATSSPSMSAVVEDKEPQPAAEEVLVISVISRDPAGFKGPALLQNILESGLRFGEMDIFHRHESMAGN GEVLFSMANAVKPGVFDLDDIDLFSTPAVSFFLGLPGPRHPKQAFDVMVAAARKLSQELNGELKDDQRSVLTAQTIEHYRQRIVEFERRALTQKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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