Pseudomonas sp. DSM 28140, TU87_RS00730
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. DSM 28140 1_831734_30.8673, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGCGCCTCGCTCATCATTATTCCTCGCGGGTCTTGAACCGTGACCCCTACCTTACTGATGTTTTTCCGTCGAGGGAACCACCCGGCACCCAGCCTGATAG CGCCTGCAAAAAACAAGGTGCCAAGCCTGCATAAAGAGTAGCCAACCTCGAAATAAATGCTCATGCGCTACGACCAAACGCACGCTTGAATCGCTCGTTA AGGCGCAGCACAACTGAACCTTTTTACGGAACGTTGAGGCTATGACGTGAACCCTGGACTAAAGTCACTTGAAACCTTAGGGTTCCACCTCATATAGGGC GCTGTGCTTAGTGCGTCAAACTGACTGTTTTTCAAGCACAATCTGTTAAAGCTAGCCCATGGCCAGCCATTACCAATTATTTTTTTTGGTTCTTGCGCTA GGTCAGTTTACTTACTACAAGTAATGGGTAGTATGTACGCCGGCTGTTTCCTCATGTTGAAGGAGCAGCTTCAATTAGAAAGTCCTTGAAGGGGAACACG
|
|
| DNA Sequence for Gene |
>TU87_RS00730
ATGAACAACGTTCTGAAATTCTCTGCTCTGGCATTGGCCGCAGTTCTGGCTACCGGTTGCAGCAGCGTATCTAAAGAAACTGAAGCCCGTCTGACTGCAA CTGAAGATGCAGCAGCACGTTCCCAGGCTCGTGCTGACGAAGCCTACCGTAAAGCTGACGAAGCACTGGCTGCTGCTCAAAAAGCACAACAGACTGCTGA TGAAGCAAACGAACGTGCTCTGCGCATGCTTGAAAAAGCAAGCCGCAAGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TAGTCCTTCGGGGCTGTTACCAAGCCGATCCATTTTATGGGTCGGCTTTTTTTTACCTGATGCTTTATCAACAGGCACTAAAAAGCCGCCGAAGTGTTAA CTGCGGCGGCTATTAGTTGAACGCTTACTGCACGTAGTCGAGCGACTGTCCTTCATCGGTCGAAGGCATAACGGTCGTAGTAACGCCAATTTCTTGCGGT ATTCCAGTTTCAGCACCCACCACCGCGAACGCTTTGTCTTTGTCGATTTGAATGCTGTTTTCCAGTTCTTTGTGCTTGAGCAGGAAATTGATAAAGCCTG CGTATTTGTTCTGCAAATCTTCTGGTGTCAGATGAGACTTGTCGCTCTTGGCGACGAGAGAGCCATCTTTGACATTCAGCGGTTCATGCACTTCCAGGTA AACCCTGCCGTTGTTGAAACCGATTTTGTAAGGCTCGTTAATGATGCGCACCGGTGTGCCGACCGGCACCATCTGCGACATTTCAAGCACGTTTTTATTC
|
|
| Amino Acid Sequence |
>hypothetical protein
MNNVLKFSALALAAVLATGCSSVSKETEARLTATEDAAARSQARADEAYRKADEALAAAQKAQQTADEANERALRMLEKASRK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|