Pseudomonas sp. DSM 28140, TU87_RS20825 (carB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. DSM 28140 14_88942_34.6293, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGCAATCACTGCCATCAAGGAAGTGCTCAACACCGAGATCCCTGTGTTCGGTATCTGCTTGGGTCACCAGTTGCTGGCTCTGGCCTCTGGTGCCAAGACG GTGAAAATGGGTCATGGTCACCACGGTGCCAATCACCCGGTTCAGGACCTGGACACTGGCGTGGTAATGATTACCAGCCAGAACCACGGTTTTGCGGTAG ACGAAGCGAGCTTGCCGGCCAACGTGCGCGCCATTCACAAGTCGCTGTTTGACGGTACGTTGCAAGGCATCGAACTGACCGACAAGAGCGCTTTTAGCTT CCAGGGTCACCCTGAAGCAAGCCCTGGCCCGAACGACGTAGCGCCGCTGTTCGATCGCTTCATCAATGAGATGGCCAAGCGCCGCTGATCGGTTTCCTGC CGTAACGCCTTGTGGCGGTCCCGATTCCGGTGACCCCCGGGCGCTTCAGGAACCTGATTGACAGCTTGCCGACTGACCTGCGGATTTGAGTGACAAACCC
DNA Sequence for Gene
>TU87_RS20825 |carB
ATGCCAAAACGTACAGACATAAAAAGCATCCTGATTCTCGGCGCTGGCCCGATTGTGATCGGCCAGGCGTGCGAATTCGACTACTCCGGCGCCCAGGCCT GTAAAGCCCTGCGTGAAGAGGGTTACCGCGTCATTCTGGTGAACTCCAACCCGGCCACCATCATGACCGACCCGGACATGGCCGACGCGACGTATATCGA GCCGATCAAGTGGCAGACTGTTGCCAAGATCATCGAAAAAGAGCGCCCGGACGCCCTGTTGCCAACCATGGGTGGCCAGACTGCACTGAACTGCGCGCTG GACCTTGAGCGCGAAGGCGTTCTGGAGAAGTTCGGCGTAGAGATGATCGGCGCCAATGCCGACACCATCGACAAAGCCGAAGACCGTTCGCGCTTCGACA AGGCCATGAAGTCCATCGGCCTGGACTGCCCGCGTTCCGGTATTGCCCACACAATGGAAGAGGCCAATGCGGTCCTCGAGCGTCTGGGGTTCCCGTGCAT CATCCGTCCGTCCTTCACGATGGGCGGTACGGGTGGTGGTATTGCTTACAACCGTGAAGAGTTCGAAGAAATCTGTACGCGTGGTCTGGACCTGTCGCCT ACCAAAGAGCTGCTGATCGACGAGTCCCTGATCGGCTGGAAAGAGTACGAGATGGAGGTGGTCCGCGATAAGAAGGACAACTGCATCATCGTGTGCTCAA TCGAAAACTTCGACCCGATGGGTGTGCACACCGGTGACTCGATCACCGTTGCTCCGGCACAAACCCTGACGGACAAGGAATACCAGATCATGCGTAACGC CTCCTTGGCGGTACTGCGTGAGATTGGCGTTGAAACCGGCGGCTCCAACGTTCAGTTCGGCATCTGCCCGGACACCGGTCGCATGGTCGTGATCGAGATG AACCCGCGCGTTTCTCGCTCTTCGGCGCTGGCATCGAAAGCGACCGGCTTCCCGATTGCCCGCATCGCTGCCAAATTGGCCATCGGCTACACCCTGGATG AACTGCAAAACGAAATCACGGGCGGCGCAACGCCTGCGTCCTTCGAGCCGTCCATCGATTATGTTGTAACCAAGTTGCCGCGCTTTGCGTTTGAAAAATT CGCCAAGGCTGACGCGCGTTTGACCACGCAGATGAAATCTGTGGGTGAAGTCATGGCTATTGGCCGGACTTTCCAGGAATCCCTGCAAAAAGCCCTTCGT GGTCTGGAAGTGGGTGTCAGCGGTCTTGATCCCAAGCTGGACCTGAGCAACCCGGAAAGCATGGCCGTGCTCAAGCGCGAGCTGACAGTGCCGGGCGCAG AGCGTATCTGGTACGTAGCTGACGCGTTCCGCGCCGGCATGACCGTTGAAGATATCTTCGGCATGAACATGATTGACCCTTGGTTCCTGGTACAGATCGA AGATCTGATCAAGGACGAAGAAAAAATCAAAACCATGGCCCTGTCCTCGATCAATCGCGACGCCATGTACCGCTTTAAGCGCAAAGGCTTCTCCGATGCA CGCCTGGCCGTATTGCTGGGCGTGACCGAGAAGAACTTGCGCCGCCACCGTCACAAGCTCGAAGTGTTCCCGGTCTACAAGCGCGTTGACACCTGCGCGG CCGAGTTCGCGACAGACACGGCCTACATGTACTCCACCTACGAGGAAGAGTGCGAAGCCAACCCTTCGGATCGTGACAAGATCATGATTCTGGGTGGTGG CCCGAACCGTATCGGCCAGGGTATCGAGTTCGACTATTGCTGCGTTCACGCGGCTCTGGCGCTGCGTGCCGACGGTTACGAGACCATCATGGTCAACTGC AACCCGGAAACCGTTTCCACCGACTACGACACTTCGGATCGCTTGTACTTCGAATCCGTGACCCTGGAAGACGTGTTGGAAATCGTGCGTGTCGAGAAGC CAAAAGGCGTCATCGTTCAGTACGGCGGCCAGACCCCGCTGAAACTGGCGCGCGCTCTGGAAGAAGCGGGTGTGCCGATTATCGGTACCAGCCCTGACGC TATTGACCGTGCAGAAGACCGTGAGCGCTTCCAGCAGATGGTTGAGCGCCTGAACCTGCGTCAGCCGCCTAACGCCACGGTGCGCAGCGAAGACGAAGCT ATTCGTGCTGCTGGCAAGATCGGTTACCCGCTGGTTGTTCGTCCTTCCTACGTGTTGGGCGGTCGTGCGATGGAAATCGTCTACGAAGAAGAAGAGCTCA AGCGCTATCTGCGTGACGCGGTGAAAGTGTCCAACGATAGCCCTGTGTTGCTCGATCACTTCCTTAACTGCGCCATCGAAATGGACGTGGATGCTGTCTG CGACGGCACTGATGTGGTGATCGGCGCGATCATGCAGCACATTGAGCAGGCAGGTGTTCACTCGGGTGACTCCGCGTGCTCGCTGCCGCCGTACTCGCTG CCGCTGCACATCCAGGACGAGATGCGCGAGCAGGTCAAGAAGATGGCGCTGGAATTGGGTGTTGTTGGCCTGATGAACGTGCAGTTGGCCTTGCAGGGCG AAGACATCTACGTCATCGAGGTGAACCCTCGTGCTTCGCGTACTGTTCCTTTCGTATCCAAATGCATCGGCGTTTCCCTGGCAATGATCGCTGCACGCGT CATGGCCGGTAAAACCCTGAAGGAAATTGGTTTCACTAAAGAGATCATTCCTAACTTCTACAGCGTGAAAGAGGCGGTGTTCCCGTTCGCCAAATTCCCG GGTGTCGATCCGATCCTTGGCCCTGAGATGAAGTCCACCGGTGAAGTGATGGGTGTGGGCGATACCTTTGGCGAAGCGTTTGCCAAGGCCCAGATGGGTG CAAGCGAAGTATTGCCAACGGGCGGTACTGCATTCATCAGCGTGCGTGACGATGACAAGCCTCTCGTGGCTGGCGTTGCGCGCGATCTGATTGACCTGGG CTTTGAGATCGTTTCCACGGTTGGCACTGCCAAGTTCATCGAGGCCGCGGGTTTGAAAGTGCGCCGCGTGAACAAAGTGACCGAAGGTCGTCCTCACGTT GTCGATATGATCAAGAATGACGAGGTCACTCTGATCATCAACACGACTGAAGGTCGCCAGTCGATTGCTGACTCTTACTCCATTCGTCGTAACGCTTTGC AGCATAAGATTTACTGCACCACGACCATTGCTGCTGGCGAAGCAATCTGCGAAGCGCTTAAATTCGGTCCTGAAAAAACCGTACGTCGTTTGCAGGATCT ACACGCAGGATTGAAGGCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCAAGTACCCAATGACAGTCCAGGGTGCAAAAGCCCTGGAAGAAGAGCACGCACACCTGACCAAGGTTGTCCGACCAAAGTTGAGCCAGGATATCGGCAC AGCGCGTGAGCTGGGCGACCTTAAGGAAAACGCTGAATACCATGCAGCCCGTGAGCAGCAAGGTATGGTTGAAGCGCGTATCCGTGACATCGAAGGTCGC ATGCAGAATGCCGTGATCATCGATGTAACAACGATTCCTCATACCGGGAAAGTTATTTTCGGTACGACGGTCGAGATCGCCAACGTTGAAACTGACGAAA GCGTTACCTATCAGATCGTTGGCGAAGATGAAGCGGACTTCAAACTCGGAAAAATCTCAGTGGGTTCGCCCCTGGCTCGTGCCTTGATTGCCAAGGAAGA GGGTGATGTCGTGGCGGTGAAAACACCGGGCGGCGTCATTGAGTACGAAATTGTTAAAGTCAGTCACATCTGAGTGAACGCGCCCGCTTCGTGCGGGCGC
Amino Acid Sequence
>carbamoyl phosphate synthase large subunit
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMADATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCAL DLEREGVLEKFGVEMIGANADTIDKAEDRSRFDKAMKSIGLDCPRSGIAHTMEEANAVLERLGFPCIIRPSFTMGGTGGGIAYNREEFEEICTRGLDLSP TKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEM NPRVSRSSALASKATGFPIARIAAKLAIGYTLDELQNEITGGATPASFEPSIDYVVTKLPRFAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALR GLEVGVSGLDPKLDLSNPESMAVLKRELTVPGAERIWYVADAFRAGMTVEDIFGMNMIDPWFLVQIEDLIKDEEKIKTMALSSINRDAMYRFKRKGFSDA RLAVLLGVTEKNLRRHRHKLEVFPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSDRDKIMILGGGPNRIGQGIEFDYCCVHAALALRADGYETIMVNC NPETVSTDYDTSDRLYFESVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLARALEEAGVPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEA IRAAGKIGYPLVVRPSYVLGGRAMEIVYEEEELKRYLRDAVKVSNDSPVLLDHFLNCAIEMDVDAVCDGTDVVIGAIMQHIEQAGVHSGDSACSLPPYSL PLHIQDEMREQVKKMALELGVVGLMNVQLALQGEDIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKEIGFTKEIIPNFYSVKEAVFPFAKFP GVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGGTAFISVRDDDKPLVAGVARDLIDLGFEIVSTVGTAKFIEAAGLKVRRVNKVTEGRPHV VDMIKNDEVTLIINTTEGRQSIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTVRRLQDLHAGLKA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site