Strain | Pseudomonas sp. DSM 28140 11_134768_29.625, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AGCCTGCAAAGCCTGCTCAAGCTCGCCGCCGCCGCTATCTCGCGCTTACAGAGCCATCAATTGTCCAGCCTTGAGCAAAGCGGGCGCACCCCCGACGGCG GGCTGTTGACCACCTGGCAGCTGGAAATCCCGATGCGTAACGCCCACGACATCGTCCCGCTGCAAGTGAAGTTCCAACGCGAAGACCCGCCCGAAAAAGA CCCTGAAGACAAGCGCGAAACCCGCGAAGTCAAAGACCCACTCTGGCGCGTGGAACTGGCCTTCGACCTCTCGCCTCTGGGGCCGCTGCACGTGCAGGCG CAATTGCTGCGCGGCAACCTGTCGGGCCAGCTCTGGGCCCGACACGCCTTCACCGCCGAACTGATCGCAAGCCAACTGGTTCACCTGCGCCAGCGTCTGA AAGACGCCGGGCTGAGTGTGACCGATCTCGATTGCCACCAGGGCACACCGCCGCAAGGTGGCCATAGCCCACTGGAACAACGCTGGGTCGACGAAACCGC
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DNA Sequence for Gene |
>TU87_RS19395
ATGAAAACGCCCACTCCCCCGCCGCGCCAGGCGATTGCCCTCAAATATGACGGCCAACAGGCTCCCACCCTCACGGCCAAAGGCGACGATGAATTGGCCG AAGCCATTCTCAAACTCGCCCGCGAGTACGACGTGCCGATCTATGAAAACGCCGAGTTGGTGAAACTGTTAGCGCGCATGGAACTGGGTGACAGCATCCC CCAGGAGCTTTACCGAACGCTGGCCGAGATCATTGCTTTTGCCTGGCAGTTGAAGGGCAAATTCCCGGCGGGATTTGATCCGGATGCGCAGCCGGTAGAG CGGGATGTAACGCCGCGATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TTAACGTCACAGGGTCAGAACGAGCCTTCGGCATTCGGGTCAATCGTGTGCGTCAGGTTAATGCCTTCAGACCATATAGACTGTTCAGCCTCCAGCGTCA GTAGATAACTGAGTTCGAAGGTGGGCGTGTATTGAAACCAGCGGGGCAAGAATGACAAATGGATCACACTGCCTGGCGCCTCATCTGTAATCGTTATTGC CAAGCCTGGCTCGCCCACCATCAGTCTACGGTCCCAACACAACCGGTAGCTGTTGCCGGGGCTTACATCCACCCCGAGCACAATCTCAACGTCAATGGCT TGCGTCACCGGGCGCATAGGTATGACACCTTGAGCATCGGCATCGGGAACTATCGGTGCAAGGGGAACCGCCGCTGGCCCAACCATCATTGAACTCCCGT CATGAGTGATGCGCGCAGTTCTAATAAACCGCAGCATTCAACATTCAAAAGAACACGTTATAAAGCGCCCTCTTTTCAGGGCATCGACTCAAATGACGCG
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Amino Acid Sequence |
>flagellar biosynthesis protein FlhB
MKTPTPPPRQAIALKYDGQQAPTLTAKGDDELAEAILKLAREYDVPIYENAELVKLLARMELGDSIPQELYRTLAEIIAFAWQLKGKFPAGFDPDAQPVE RDVTPR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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