Pseudomonas sp. DSM 28140, TU87_RS19240
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. DSM 28140 11_134768_29.625, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACCGCGACGGCTGTTTTATAAAAGGCAATTGCGCTGGTGGTTAAGCCGGCGCTTATTAATAACTTGCTCAATGCGCCGATTGTGGCATTGAGTGCCGCTG CGCAGACAGCAAAACAAATGCCTGAAAGATGACGTGGCATGGTGAGGTCTCATCGTGGTTGGGGGTGTAACCCTGAAGAGGAGTTGGTGGCGCCCTTTAT TAATGGGGTCGGTTGAATAAATAAGTGTCAGGGTTTCCTGAGAAATGTTTTTTATCATTGGTGTTGTTGGTTTGCAAACAACCAGTCAGTCTTGTTTAAG AAAAGGATGACAGAGTGCATGTAAGAGCAGCGGCTAATGGTTTGAATAATCAAACATATTTTTAGACAAGTGGGTGTTGGCGCAGCCGAAGGCTGCGATT TTTTTGATCCGCTCAGGGTGAGCGTGCAGCGTTGGCAGGTGCGAAATCAAAATCCGGGTCTATAGTCTGAGCACCCGAACTCAGAGAAGGATGCGTACTT
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| DNA Sequence for Gene |
>TU87_RS19240
ATGGCTGTGACATCTGAACTGTCGCCGGAAGGCACTGCGCTGACCCTTAGTATTAAAGGCCGCTTTGATTTCGCCAAACATCAGGACTTCAGGGGGGCGT ACGAAAAGCCTATGACCAAGCCCGAGCTGTTCGTGGTTGATCTAAAAGAGACGACCTACGTAGACAGCTCCGCCCTGGGCATGCTGCTGCTGTTACGAGA ATATGCCGGTGGCGATGAGTCCGATGTGAGGGTCGTTAATTGCAATAGTGATGTGCGAAAAATTCTCGCCATCTCCAATTTCGATAAGTTGTTCGACATT AGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACACGCCATTGCCGCACGCTCAGACGCTGACGGTGTTGATCGCCGAAGACAGTGCGGTCGACCGTTTGCTGCTGTCGCGTATCGTGAGCAAACAAGGCCA TCAGGTGCTGTTGGCCGGTAATGGCGCCGAAGCGGTGGCGCTGTTTATTGAGCTGCGTCCGCAATTGGTGTTGATGGACGCCTTGATGCCGGTGATGGAT GGTTTTGAAGCGACGCGCCAGATCAAAGCCCTGGCCGGTGAGGTGCTGGTACCGATTATTTTTCTGACCTCGCTTGAACACGCCGACGCCTTGAAACGGG CGCTGGAGGCAGGGGGCGATGATGTGTTGATCAAACCCTATAACCCCTTGGTGTTGGCGGCCAAAATCACCGTTATGGACCGCTTGCGGCGTTTGCAAGA CACGGTACTGCAACAGCGCAACCTGATTGCTCAACACAACAGTTATTTGCTTAACGAACAGCGGGTGGCCAAGGCGGTGTTTGATCGGGTGGCGCACTCG
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| Amino Acid Sequence |
>anti-anti-sigma factor
MAVTSELSPEGTALTLSIKGRFDFAKHQDFRGAYEKPMTKPELFVVDLKETTYVDSSALGMLLLLREYAGGDESDVRVVNCNSDVRKILAISNFDKLFDI S
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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