Pseudomonas sp. DSM 28140, TU87_RS18690
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. DSM 28140 10_141347_29.5951, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACGACTCGGCCAGTCTGCCGATCCTGATGTTGACGGCCCGCGACGATAGTCATGATCAGGTGCTAGGGCTAGAGATGGGTGCCGACGATTATGTGACAAA ACCTTGCGAGCCGCGTGTGCTACTGGCGCGAGTACGCACTTTATTGCGCCGCAGCAGCCTGATTGAGCCACAAATGGCCAATGACCGAATCCTGATTGGC AACCTGTGCATCGACCTTTCTGAGCGCACCGTATGCTGGCGAGGCCAGGACATCGAGTTGTCCAGCGGGGAGTACAACTTGCTCGTGGTGCTGGCAAGGC ATGCCGGAGAAGTGCTCAGCCGCGATCAGATTCTTCAGCGTTTACGCGGTATTGAATTCAATGGCACAGACCGCTCCGTTGATGTGGCCATCTCCAAATT GAGGCGCAAGTTCGACGATTGCGCGGGCGAAGCCCGCAAAATCAAAACAGTGTGGGGCAAAGGGTATTTGTTCAGCCGTTCCGAGTGGGAATGCTGAGCG
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| DNA Sequence for Gene |
>TU87_RS18690
ATGTTCAAGGTTCTGCTACGGCTTTATCTGGTCACGATGGTGACCTTCGGCGCAGCCATTTATCTGGTGCCGGAGCTGATCGTGACGGTGTTTCACGAGC GTTTCATGCATTACAACGTCGACATGTCCCGTGGCATGCAAACCCTTCTGGTCAAACAGTTCCACCCGTTACCCGCTGAACAGTGGCCAACACTGGCCCG CGAGCTGGACACGAAATTCTCCCCGTTGCGGGTCAATTTACTGTCGATCAACGACCCTAAATTCAACGCCCGGGAGCGCCATCAACTGGAGCAAGGCCAA GGTGTGCTGCGCATCGGCGAGTGGGGCTGGCGCACATTAGCGGTTTCCCCCCTGAACCGACAACAAGCGATTGAGCTGGTGATGCCCCCCGACCCGTTCG ACATGAACGTGTTGTACTGGAGCATCAACGTTTTGATCGGCGCAGCCTTGCTCGCCTGTCTGTTGCTGTGGTTGCGTCCGCACTGGCGTGACCTTGAGCG GCTCAAGCGCACGGCCGCACAGATTGGCCAGGGCCACTTGAGCGCGCGCACCCACATCTCGCCACGTTCCAATGTTCATGCGCTGGCCAGCGCTTTTGAC ACCATGGCGCAAGACATCGAAAGCCTGCTCAACCAGCAGCGCGACCTGCTCAATGCGGTGTCTCACGAACTGAGAACGCCCCTGACCCGGCTCGATTTCG GCCTGGCGCTGGTGCTGTGCGATGACCTGCCGCCTGCCAGCCGCGACCGCCTGCTGGTGCTGGTTGGCCACATACGCGAGCTGGATGAGCTGGTGCTGGA GCTGCTGTCCTTCAGTCGCCTGAAAAACCCGACGTTGGTGCCGGAACGTGTCGATGTGTCGCTGGACGAGTTCATTGACAGCATTCTTGGCAGTTTCGAT GAAGCGCTCGAAACCCCGGACATTGTGCTGGACGTGTTGATGCAAGGGACTCAGGCCCGATTTGCCCTTGATCCCCGGCTGACAGCGCGCGCGCTGCAAA ATCTGCTGCGCAATGCCATGCGCTATTGCGATCACCGCATTCAAGTAGGGGTCAATGTCACACCCCAAGGCTGTGAGTTATGGGTGGACGACGACGGTAT TGGCATTGCCGAGGTGGATCGCGAGCGGGTTTTTGAACCGTTCTACCGCCTGGATCGCAGCCGGGACCGCGCAACGGGGGGCTTTGGACTTGGATTGGCC ATCAGTCGACGCGCCCTGGAAGCCCAGGGCGGTACGTTAAAGCTTGAGCAATCCCCCCTGGGTGGGGCGCGCTTTAGACTGTGGTTGCCTGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CTTAGAGAGAGCGGCGCTGGCGGCTCACATGCTTGAGGCCTTCGAGCACCAGCACCCCGACGGCCAGCCAGATCGGTCCGTAGGTCAGCCATTGCCCTTC TTCCAGGCTGTCGCCCAGCAACAGGGCGACGGCCACCAGTAACACCGGTTCGACGTAACTGAGCAGGCCGAACAGGCTAAACGGCAGCAAGCGGCTGGCC AAGATGTAAGCAAAACCTGCCGCGGCACTGATAATACCCATCAGCGGAACGAGCGCGAACAACAGCGGGCGCTGCGCATCGAGATCGACATGCTCGCCGG CAAGTACAAACCATAGCGCAACCGGCACCATCAACAGCATGTCCAGCCACAACCCGCCCAAGTTGTCGATGCCGATTTTCTTGCGCAGCACGAAATACAT CGGGTAGCCGATGGCGACCACCAGCGTGGTCCATGAAAAACCACCGGTACGGTACAACTCGTTGGCAACCCCGACCACGGCCAGGGCGGTGGCGATTTTT
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| Amino Acid Sequence |
>histidine kinase
MFKVLLRLYLVTMVTFGAAIYLVPELIVTVFHERFMHYNVDMSRGMQTLLVKQFHPLPAEQWPTLARELDTKFSPLRVNLLSINDPKFNARERHQLEQGQ GVLRIGEWGWRTLAVSPLNRQQAIELVMPPDPFDMNVLYWSINVLIGAALLACLLLWLRPHWRDLERLKRTAAQIGQGHLSARTHISPRSNVHALASAFD TMAQDIESLLNQQRDLLNAVSHELRTPLTRLDFGLALVLCDDLPPASRDRLLVLVGHIRELDELVLELLSFSRLKNPTLVPERVDVSLDEFIDSILGSFD EALETPDIVLDVLMQGTQARFALDPRLTARALQNLLRNAMRYCDHRIQVGVNVTPQGCELWVDDDGIGIAEVDRERVFEPFYRLDRSRDRATGGFGLGLA ISRRALEAQGGTLKLEQSPLGGARFRLWLPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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