Pseudomonas sp. CCOS 191, CCOS191_RS25505

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0005524	ATP binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00300	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0016887	ATPase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00004	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	psec02025	Biofilm formation - Pseudomonas aeruginosa	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	psec03070	Bacterial secretion system	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
FunFam	G3DSA:3.40.50.300:FF:000010	Chaperone clpB 1, putative	-	-	180	372	5.4E-83
Gene3D	G3DSA:3.40.50.300	-	IPR027417	P-loop containing nucleoside triphosphate hydrolase	574	791	5.2E-67
Pfam	PF17871	AAA lid domain	IPR041546	ClpA/ClpB, AAA lid domain	372	464	1.6E-28
Pfam	PF10431	C-terminal, D2-small domain, of ClpB protein	IPR019489	Clp ATPase, C-terminal	793	867	3.0E-11
Coils	Coil	Coil	-	-	442	462	-
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	699	717	3.2E-30
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	732	746	3.2E-30
Pfam	PF00004	ATPase family associated with various cellular activities (AAA)	IPR003959	ATPase, AAA-type, core	233	366	7.4E-9
Coils	Coil	Coil	-	-	527	547	-
Coils	Coil	Coil	-	-	480	500	-
Gene3D	G3DSA:1.10.1780.10	-	IPR036628	Clp, N-terminal domain superfamily	1	161	8.6E-42
PANTHER	PTHR11638	ATP-DEPENDENT CLP PROTEASE	-	-	18	867	0.0
NCBIfam	TIGR03345	JCVI: type VI secretion system ATPase TssH	IPR017729	AAA+ ATPase ClpV1	13	877	0.0
FunFam	G3DSA:3.40.50.300:FF:000025	ATP-dependent Clp protease subunit	-	-	574	791	4.4E-79
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	625	643	3.2E-30
CDD	cd00009	AAA	-	-	211	366	5.28373E-15
Gene3D	G3DSA:3.40.50.300	-	IPR027417	P-loop containing nucleoside triphosphate hydrolase	374	568	2.2E-52
SMART	SM01086	ClpB_D2_small_2	IPR019489	Clp ATPase, C-terminal	793	885	8.2E-9
Gene3D	G3DSA:1.10.8.60	-	-	-	793	887	1.2E-6
SMART	SM00382	AAA_5	IPR003593	AAA+ ATPase domain	621	764	3.5E-7
SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	IPR027417	P-loop containing nucleoside triphosphate hydrolase	570	864	5.34E-62
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	670	688	3.2E-30
Pfam	PF07724	AAA domain (Cdc48 subfamily)	IPR003959	ATPase, AAA-type, core	620	786	3.0E-39
SMART	SM00382	AAA_5	IPR003593	AAA+ ATPase domain	228	369	2.1E-10
SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	IPR027417	P-loop containing nucleoside triphosphate hydrolase	189	515	7.19E-73
Gene3D	G3DSA:3.40.50.300	-	IPR027417	P-loop containing nucleoside triphosphate hydrolase	182	372	1.2E-71
CDD	cd19499	RecA-like_ClpB_Hsp104-like	-	-	583	791	5.15486E-82
SUPERFAMILY	SSF81923	Double Clp-N motif	IPR036628	Clp, N-terminal domain superfamily	12	131	1.02E-18

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.