Strain | Pseudomonas sp. CCOS191 genome assembly Pseudomonas sp. strain CCOS191, chromosome : I. [Details] | |
DNA Sequence Upstream of Gene |
CAGCACCCGCTCGGGTAGCGCGATGTTCCACTATCAGCCTGAAGACAATCCGAACAAGGTCGTCAACCTCGGCTACCGCTACCGCAACGACCTGATCACC TACGACTCGGCGACCGGTCTCTGGAAAGTCGGGGGTGGTGACTATGGCACTCCGGGCGATCCGAACTACATCAAGGATTACTACAAAATCCAACAGCACG ACTTCTCGGTCATCTGGCCGATCGTGCCGCAGTGGAGCGTCATCGCTCGTTGGCAGCATGACTACAACCGTAATCGCACCCTGGAAGCGATGGGCGGCTT CGAGTACGACAACTGCTGCTGGAAGCTGCGCCTGATCAACCGCTACTGGATCGACTACGACGACTTCAGCCAGGCCGTCCCGAACAACGAGAAGGGCGAC CACGGTATCTTCCTGCAGATCGTGCTCAAAGGGCTCGGTGGTGTAGTCGGCAACAAGGTCGAATCGTTCCTGGACCAAGGCATTCAAGGTTACCGTACCC
|
|
DNA Sequence for Gene |
>CCOS191_RS24825
GTGAAGAGCAAGCTTATTGATCGTCTGCGCCCGCTGATGCTGGGCGCCGCAATGCTGAGTGGCGCGGTGCATGCCGCGGTACAACCCATCGACCGCATCG TGGCCACCGTCGACAACGACGTGGTCATGCAGAGCCAGCTGGACCAGCGCGTTCGCGAAGTGCAGCAGACCATCGCCAAGCGTGGCGGCGGCGTGCCGCC CACCAGTGCGCTGGAACAGCAAGTGCTGGAACGCCTGATCGTCGAGAACCTGCAACTGCAGATCGGCGAGCGCTCTGGCATCCGCATCACCGACGAAGAG CTGAACCAGGCCGTCGGCACCATTGCCCAGCGCAATGGCATGTCGCTGGAACAGTTCCGCGCCGCCCTGGCCCATGACGGCCTGTCGTACGACGATGCCC GCGAGCAGATCAAGCGCGAGATGATCATCAGCCGCGTACGTCAGCGCCGCGTCGCCGAGCGTATCCAGGTGTCCGAGCAGGAAGTGAAGAACTTCCTCAA CTCGGACCTGGGCAAGATGCAGATGTCCGAAGAGTACCGCCTGGCCAACATCCTCATCCCGACCCCCGAAGGCGCCAACTCGGAGGCCATCCAGGCCGCC GCGCGCCAGGTAGGCGATGTCTACCAGCAGCTCAGACAAGGCGCGGACTTTGGCCAGATGGCCATCGCTCGCTCGCGCAGTGAAAACGCCCTGGAAGGCG GTGAGATGGGCTGGCGCCAGGCAGGCCAGCTGCCACCAGACTTCGCCAAGATGCTCAGCAGCATGGCGGTCGGCGACATCACCCAGCCGATCCGCATTCC CAACGGCTTCATCATCCTGAAGCTGGAAGAGAAGCGCGGCGGGAGCCAGAGCGTGCTGCGCGACGAAGTGCATGTACGTCACATCCTGATCAAACCGAGC GAAATCCGCAGCGAAGCCGCCACCGAGCAACTGGCCGAGCGCCTGTACGACCGGATCCAGAACGGTGAAAACTTCGCCGAGCTGGCGAAGAGCTTCTCGG AAGACCCGGGTTCGGCGCTCAACGGCGGCGATCTCAACTGGGTCGACCCGAACAGCCTGGTACCTGAGTTCCGCGAGCAGATGGCCAACGCCGAGCAAGG CGTGGTGACCAAGCCGTTCAAGACCCAGTACGGCTGGCATGTGCTGGAAGTGCTGGGCCGCCGCGCCACCGACAGCACCGAACAGGCTCGCGAGCAGCAG GCCATGAACGTCCTGCGCAACCGCAAGTACGACGAAGAGCTGCAGAACTGGCTGCGCCAGATCCGCGACGAAGCCTACGTTGAAATCAAGCTGCCTGGCG CCGACCAGGTCGCCCAGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
AACCCCTGCGCTTCGCCGTCACCCCCGGCGAGCCAGCCGGCATCGGTCCCGACCTGTGCCTGCTGCTCGCCGCCGAGGCCCAGCCCCACCCCCTGATTGC CATCACCAGCCGTGACCTGCTCGCCGAGCGGGCCACGCAGCTGGGCCTGGACGTCAAGCTGATCACGGTTGTACCGACCGCCTGGCCTGAGCAACCGGCT GCCGCCGGCAGCCTGTATGTCTGGGATACCCCCCTGGCCCGCCCGGTGACAGCCGGGCAGCTGGACAAGGCCAACGCCGCATTCGTCCTGGAAACCCTGA CCCGTGCCGGGCAAGGCTGCCTGGACGGGCACTTCGCCGGGATGATCACCGCGCCGGTGCACAAGGGCGTGATCAACGAAAGCGGTATCGCCTTCTCCGG GCATACCGAGTTCCTCGCCGACCTCACCCACACCACGCAAGTGGTGATGATGCTGGCCACCCACGGGCTGCGCGTGGCACTGGTGACCACCCACCTGCCC
|
|
Amino Acid Sequence |
>molecular chaperone SurA
MKSKLIDRLRPLMLGAAMLSGAVHAAVQPIDRIVATVDNDVVMQSQLDQRVREVQQTIAKRGGGVPPTSALEQQVLERLIVENLQLQIGERSGIRITDEE LNQAVGTIAQRNGMSLEQFRAALAHDGLSYDDAREQIKREMIISRVRQRRVAERIQVSEQEVKNFLNSDLGKMQMSEEYRLANILIPTPEGANSEAIQAA ARQVGDVYQQLRQGADFGQMAIARSRSENALEGGEMGWRQAGQLPPDFAKMLSSMAVGDITQPIRIPNGFIILKLEEKRGGSQSVLRDEVHVRHILIKPS EIRSEAATEQLAERLYDRIQNGENFAELAKSFSEDPGSALNGGDLNWVDPNSLVPEFREQMANAEQGVVTKPFKTQYGWHVLEVLGRRATDSTEQAREQQ AMNVLRNRKYDEELQNWLRQIRDEAYVEIKLPGADQVAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|