Strain | Pseudomonas sp. CCOS191 genome assembly Pseudomonas sp. strain CCOS191, chromosome : I. [Details] | |
DNA Sequence Upstream of Gene |
ACTTCATCGAGGCCCAGCTGGCGGCCCAGGAAGATGTGATCAAGCATCGCGACATCCTCGCCACCTGGCGCATCGAGACCGAAAGCCCGTTGGGCTTCTT CGACCGTGAACTGGTCGCCTCGGTGGTGGCCAACGTCCTTACCAACGCCATCCGCTATGCCGGCCACGCCTTGTTGATCAGCATCGAGGAAGAGGGCGAG CAGCTGGTGATCAGCGTCAACGACGACGGCGCCGGTTATCCACAGCGCATGCTCGAACGCCAGCATGACTACGTGCAGGGCATCGATTCGCAGAGTGGCA GTACCGGATTGGGGCTGTATTTCGCGGCGCGGATTGCCGCGTTGCACGAGCGCAATGGCGTGCGCGGGCGGATCGAGATCGCCAATGGCGGGACGCTGGG GGGCGGGTTGTTCCGGTTGTATCTGCCTTGATTTGGTGAGAGGCAAGCTGGACCATGGTCATATTCGCTCCCTCTATCGACTGTACCGAGTTCCAGAACG
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DNA Sequence for Gene |
>CCOS191_RS22815
ATGAACCCATTGCCCGTTAGCCTCATCCGCGAAACCTTCCCCGTCGGCCCCTTGCAGTGCAACTGCACCTTGATCGGTGACCCGGTCAGCAAGCACGCCA TCGTCGTCGACCCGGGCGGGGACGAGCAGAAGATCCTCGCCCGCCTGCAGCATCATGGCCTGACCCTGGTGAGCATCATCCACACTCACGCGCACTTCGA CCATTTCCTCGCCTCGGGCAGGCTCAAGGAGCTGACCGGCGCCACGCTGCACCTGCACAAGGCCGACCAGCCGCTGTGGGAAAACCTGGAAATGCAGTGC CAGATGTTCGGCGTGCCCTATACGCCGGTACCGTCGCCGGACCGCTGGCTGAGCGACGACGAGGCGCTGGCCTGCGGCTGCGGCGTGGCGTTGCACACCC CCGGGCACACGCCGGGCTCGATGAGTTTCTGGTTCGCCGAGCACAAGTTGCTGATCGCCGGCGATACCTTGTTCCGCCGTGGTGTCGGGCGCACCGATTT GTGGGGAGGCGATCAGCGGGCTATCGTTCGTTCCATCAAGGAACGGCTGTACCGCCTGGATGAGGACGCCATCGTGGTGACCGGCCATGGCCCGGACACC CGCCTCGGCGACGAGATGCGCGAGAACCCCTTCGTGCGCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGTTTCATGGAATTTTTCCGCTGCGCTGCAATCCAAGGCTGGCATAGATCCGTAGTCGATCCGCTGCACTTTCGAATTTCAGTAGGAGCTTGTCCATGTT CACCATGCGTCGTCTGATTATCGTCGCTACCGCCGCCGCGCTGATGTCTGGTTGTGCCAGCCCCAACCCGTATGACAGCCAGGGCCAGGCGCAGGGCTCC ACAGGGATGAGCAAGACCGCCAAATATGGTGGCCTGGGCGCGCTGGCCGGCGCCATCGCCGGTGCCGCCATCGACCACAACAACCGTGGCAAGGGGGCGT TGATCGGCGCCGCCGCGGTCGGTGCCGCCGCTGCCGGTTACGGCTACTACGCCGACAAGCAGGAAGCCGAGCTGCGGGCGCAGATGGCCAATACCGGCGT CGAGGTGCAGCGCCAGGGTGACCAGATCAAACTGATCATGCCGGGCAACATCACCTTCGCCACCGATTCGGCGAACATTGCCCCAAGCTTCTACTCGCCG
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Amino Acid Sequence |
>MBL fold metallo-hydrolase
MNPLPVSLIRETFPVGPLQCNCTLIGDPVSKHAIVVDPGGDEQKILARLQHHGLTLVSIIHTHAHFDHFLASGRLKELTGATLHLHKADQPLWENLEMQC QMFGVPYTPVPSPDRWLSDDEALACGCGVALHTPGHTPGSMSFWFAEHKLLIAGDTLFRRGVGRTDLWGGDQRAIVRSIKERLYRLDEDAIVVTGHGPDT RLGDEMRENPFVRA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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