Pseudomonas sp. CCOS 191, CCOS191_RS10100
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. CCOS191 genome assembly Pseudomonas sp. strain CCOS191, chromosome : I. [Details] | |
| DNA Sequence Upstream of Gene |
CGACTTCGCCCGCCAGCCCAAGCTGCCGGCGGCCGAGCGGCGCGCGCGTATTGACCACGCCATCGACGCGGTGGGCCTGGCCCACGCCCGTGGCCAGTAC CCGGCGCAGTTGTCCGGCGGCATGGCCCAGCGCACCGCGCTGGCCCGCTGCCTGGCGCGCCAGCCCGAGGTGCTGTTGCTGGACGAGCCATTCGGCGCGC TGGACGAGGTGACCCGCGCCGACATGCAGCAACTGCTGCTGCAACTGATTGCCACCCACAATACCGCCGCCGTGCTGATCACCCACGATATCGACGAAGC CCTGCTGCTGTCCGATCGCGTGCTGCTACTGGGCAACCACCCGGCGCGCACCCTCGGCCAGTGGCACATCGACCTGCCGCAGCCCCGCGCGCAGCGGGTC GAGGAGCTGGGCGCGCTGCGTATCGAAATCCTCAAGACCCTTCGGCGGGCAAGCCGCACAGCCGAACCCACCCCATCCCCCTTGCCCTCGGAGGCTGTCC
|
|
| DNA Sequence for Gene |
>CCOS191_RS10100
ATGTGCATGGATGACTGCTGTTCCACCACGTCCCGTCGCGATTTTCTCAAGCTCAGTGCCATGCTCACCGCCGCCGGCGCCGTGCCGTTGCTGTCGAGCC TGCAAGCCCGCGCGGCCGCCGAGCCGGACGCGCCGGTGCGCATCGGCTACCTGCCGATCACCGATGCCACGCCACTGCTGGTGGCGCACAACAACGGCCT GTTCGAGGCCGAGGGCATCAAGGCCGAGCGCCCGGTGCTGCTGCGCAGTTGGGCCCAGGTGATCGAGGCGTTCATCTCCGGGCAGGTCAACGTCATCCAC CTGCTGTCGCCGATGACCGTGTGGGCGCGCTACGGCAGCAAGGTGCCAGCCAAGGTCGTGGCCTGGAACCACGTCGGCGGCTCGGGCCTGACCGTGGCCC CGGACATCACCGACATGAAGCAGCTCGGCGGCAAGACCGTGGCCATTCCGTTCTGGTACTCGATCCACAACGTGGTGCTGCAGCAGATGCTTACCGACAA CGGCCTCAAACCGGTGTCCAAGCCCGCCACCGCGCAGTTGGCGGACAACGAAGTCAACCTGCTGGTGCTGCCGCCTTCGGACATGCCGCCGGCCCTGGCC AGCAAGCGCATCGCCGGCTATATCGTCGCCGAACCGTTCAACGCCCTGGCCGAGAACCTCAAGGTCGGCCGCGTGCAGCGCTTCACCGGCGACGTCTGGC GCAACCACGCCTGCTGTGTGGTGTTCATGCACGAGCATGACCTGAACAATCGCCCGGAGTGGTCGCAGAAGGTGGTCAACGCCATCGTCAAGGCCCAGCA CTGGACCCGCGAGCACCGTGCCGAGGCCGCGGCGTTGCTGTCCAAGGCCGGCCCCAACAAGTACACCCCGCACGAGCCGGCGGTGCTGACCAAGGTGCTG GCGCCATCGGCCGAGGACCGTGCTGGCTACATCGCCAGCGGCGCGATCCAGCACCAGCAGTGGGACGAGAAGCGCATCGACTTCCAGCCTTACCCGTTCC CCAGCTACACCGAGGAGCTGGTCAAGCGCCTGAAGAACACCCTGATCGTCGGCGAGAGCGATTTCCTTGCCGCCCTCGACCCGGCCCAGACCGCCCGCGA CCTGGTGGACGATCGCTTCGTGCGCAACGCCATTGCCGCGGTGGGTGGCCCGGCGGCGTTCGGCATTGCCGAGAACTTCCAGCGTAGCGAGGAGTTCGCG GTCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TGCGCAGGCATTTCGTGCATGGCGCCCTGGGCCTGGCGGGCCTGGCGGCGCTGCTGTTGCTGTGGTGGGCGGGGGTGCGCCTGTTCGGCGCCGCCGATGG CCTGTCGGCGCGCTTCGCGCCGCAGGCCACGCTGCAAAGCCTGATCGAGCTGCTGGGGCAGGGCGAGGTCTACGGGCATATCTGGGTGAGCCTCGAGCGT ATCCTCGTCGGCCTGCTGCTGGCGCTGCTGATCGGCGTGCCGCTGGGCCTGCTGGTGGGCAGCTATCGCCACCTGGAGGCGGCGACCACGCCGGCGTTCC AGTTCCTGCGCATGATCTCGCCGCTGTCGTGGATGCCGGTGGTGGTGATGCTGATGGGCGTGGGCGACCAGCCGATCTACTTCCTGCTGGCCTTCGCCGC GCTGTGGCCGATCCTGCTCAACACTGCCGCCGGGGTGCGCCAGCTCGACCCTCGCTGGCTGCAGTTGAGCCGCAGCCTGAGCGCCACGCGCTGGGAGACG
|
|
| Amino Acid Sequence |
>ABC transporter substrate-binding protein
MCMDDCCSTTSRRDFLKLSAMLTAAGAVPLLSSLQARAAAEPDAPVRIGYLPITDATPLLVAHNNGLFEAEGIKAERPVLLRSWAQVIEAFISGQVNVIH LLSPMTVWARYGSKVPAKVVAWNHVGGSGLTVAPDITDMKQLGGKTVAIPFWYSIHNVVLQQMLTDNGLKPVSKPATAQLADNEVNLLVLPPSDMPPALA SKRIAGYIVAEPFNALAENLKVGRVQRFTGDVWRNHACCVVFMHEHDLNNRPEWSQKVVNAIVKAQHWTREHRAEAAALLSKAGPNKYTPHEPAVLTKVL APSAEDRAGYIASGAIQHQQWDEKRIDFQPYPFPSYTEELVKRLKNTLIVGESDFLAALDPAQTARDLVDDRFVRNAIAAVGGPAAFGIAENFQRSEEFA V
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|