Strain | Pseudomonas sp. CCOS191 genome assembly Pseudomonas sp. strain CCOS191, chromosome : I. [Details] | |
DNA Sequence Upstream of Gene |
CGGCATGCGCCCGAGCTTTTCGACGGCTGCGCCACCGGCCCTTGGCGCTGCGCTTTTCGACTATCTTTTGAATCAGGCACAAGGTCAGCACCCGCAGGTG GCCAGTGGTCGCTTCGGCGCTGACATGCAGGTGCATCTGGTCAATGATGGCCCGGTAACATTTATGTTACAAATATGAGGTCAAAAAACCCTTTGTTTGG CGAAAACAAGGGGTTTTGTACGATAAATAGTTTGTTCAGCCTGATGCGTTGTAACGCGACCTGCTGGATAATCGCGCGCTGCATGAACCTGCGTTCGCAG GTTCGTTTCACTTTGACTCGAGCATTGTCAGGATCCGTTTGGGGAATCATTACGCCCTCACGGGGTCCGAACAGTGCTCGCCAACCCGGCATTTGTCGCT GGCCGTTGGTTTCATGATCTGTTTTCGGCGAGGATTGCTCGTGATTGTAAGCCCCTGTATTGCACCTAGAATCCCCGGTACCCGGCTGCGCAAGGCCCTG
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DNA Sequence for Gene |
>CCOS191_RS02300
TTGGCCGGCGTGGCGCTGGTCGGCCTGATGAGCGCGGGCCAGCTGTGGGCATTCAATCTGGACGATGTTGCAGCCAAGGCAAAGGATCTGGCCGGTCAGA AGTTCGAGGCACCGAAGAGCAACCTGCCGCCGGTGTTCCGCGACATGAAGTACGCCGACTACCAGAAGATCCGCTTCCTGCAGGAAAAGGCCGAGTGGGC CAAGGACAAGACGCCGTTCAAGCTGTCCTTCTACCACCAGGGCATGCATTTCGACACGCCGGTGACCATCAACGAGATCACCGCCAACAAGGTCAAGGAA ATCAAGTACGACCCGAGCCGCTTCGAGTTCGGTGACGTGCCCCATGACGCTGATGCCACCAAGAATCTCGGCTATGCCGGTTTCCGTGTGCTCTACCCGA TCAACAAGGCCGACAAGCAGGACGAGATCATGACCCTGCTTGGCGCCAGCTACTTCCGCGTGGTCGGCAAAGGCCACCGCTATGGCCTGTCGGCCCGTGG CCTGGCCATCGACACCGCGCTGCCGTCGGGCGAGGAATTCCCGCGTTTCCGCGAATTCTGGATCGAGAAGCCCAAGCCGAACGACAAGCACCTGGTGATC TACGCACTGCTCGACTCGCCGCGCTCCACCGGTGCCTACAAGCTGACCCTGCGTCCGGGCGAGGACACCCTGGTCGACGTCAAGTCGCGCGTCTACCTGC GTGACAACGTCAGCCGCCTGGGCATCGCCCCGCTGACCAGCATGTACCTGTTCGGCCCCAACCAGCCGTCGAAGGTCATGAACTACCGCCCGGCCCTGCA CGACTCCGAAGGCCTGGCTATCCATGCCGCCAACGGCGAGTGGCTGTGGCGCCCGCTGAACAACCCGAAACACCTGGCCGTGAGCAACTTCAGTGTCGAG AACCCGCGTGGTTTCGGCCTGCTGCAGCGCCAGCGCGCCTTCAGCGACTACGAAGACCTCGACGACGAGTACGAAAAGCGTCCTAGCGCCTGGATCGAGC CGAAGGGTGATTGGGGCAAGGGCACCGTCGACCTGGTCGAGATTCCGACCGCCGACGAAACCAACGACAACATCGTGGCTTTCTGGAGCCCGGAAAAGCT GCCTGAGCCAGGCAAGCCGTTCGAATACGACTACCGCCTGCGCTGGACCATCAAGGAAGACCAGCTGCACCCGCAGGAACTGGGCTGGGTCAAGCAGACC CTGCGCTCCGCCGGTGACGTCAAGCAGTCCAACCTGATCCGCCAGACCGACGGCAGTGTTGCCCTGCTGGTCGATTTCATCGGCCCGAACCTCGCGGCAT TGCCGGCTGATACCGCCGTGCGCAGCCAGGTCAGCGTCGGCGACAACGCCGAAGTGGTCGAGAACAACCTGCGTTACAACCCGGAAACCAAAGGCTGGCG CCTGACCCTGCGCCTGAAGGTGCAGGATCCGAAGAAATCCACCGAGATGCGCGCCGCGCTGCTGCGTGACGTGCCGGTCGAGCAACCGAAGCCCGCCAAG GAAACCAAGCAGGACAAGGCCGCGGCCAAGCACGCCCACGCCAAGGCTGAGAAAGCCAAGGCCGAGCAGGCTGCCGAGCAACCCGCCGCCGACGCGGCAT CCACCAACGGGGCCCCGGCCACCACCGAGAAGGTGCTGACCGAGACCTGGAGCTATCAGTTGCCTGCCGATGAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CTCAAGCGCAAGGCCGGAATCGCTTGGCGAATACCTGGCCCACCTCCCACTGAGCGACGAGCAACGCGCGGAACTCGCCCGTTGCACCTCGTTCAGCGAG CTGCACCAACGCCTGGCGGCCAACCCGGCCGCCGCCACCGCCGAGGCCGTCCAGGCTTCGGTGGGGGCCCGTCTTACCGTAGGCAGCGCCGCCGAACTGG AAGAGGCCGAGATGCTCGGCGTCGATGGCAGCGGCCGCCTGTGCCTGAAGATCGCCCCACCGATCAAACGCACCAAGGTCGTGCCCGAGCCGTGGCGCAC CAACGTGCTGATCCGCATGTGGCGGCGCATGACCGGCCGCACCAACGCCCCGCAGCCGCCCAAGCGCGAGCTACCGCCGGCACGCTGGCGCACGGTCGGC TCGATCCGCCGCTATATCCTGCTCACCCTGATGATCGGCCAGACCATCGTCGCCGGCTGGTACATGAAAGGCATCCTGCCGTACCAGGGCTGGTCGTTCG
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Amino Acid Sequence |
>glucan biosynthesis protein G
MAGVALVGLMSAGQLWAFNLDDVAAKAKDLAGQKFEAPKSNLPPVFRDMKYADYQKIRFLQEKAEWAKDKTPFKLSFYHQGMHFDTPVTINEITANKVKE IKYDPSRFEFGDVPHDADATKNLGYAGFRVLYPINKADKQDEIMTLLGASYFRVVGKGHRYGLSARGLAIDTALPSGEEFPRFREFWIEKPKPNDKHLVI YALLDSPRSTGAYKLTLRPGEDTLVDVKSRVYLRDNVSRLGIAPLTSMYLFGPNQPSKVMNYRPALHDSEGLAIHAANGEWLWRPLNNPKHLAVSNFSVE NPRGFGLLQRQRAFSDYEDLDDEYEKRPSAWIEPKGDWGKGTVDLVEIPTADETNDNIVAFWSPEKLPEPGKPFEYDYRLRWTIKEDQLHPQELGWVKQT LRSAGDVKQSNLIRQTDGSVALLVDFIGPNLAALPADTAVRSQVSVGDNAEVVENNLRYNPETKGWRLTLRLKVQDPKKSTEMRAALLRDVPVEQPKPAK ETKQDKAAAKHAHAKAEKAKAEQAAEQPAADAASTNGAPATTEKVLTETWSYQLPADE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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