Pseudomonas sp. CB1, TD31_RS15100
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. CB1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TTGAAAAGCCGGACCTTCCTGGCCGAGCTGATGCCCCATTACCCCATTTATGTTCCGCTGTTGCCGGATGCCGCCCAGGAAGCCATGGGCCAAGTACATC CCAGGGCACAGATCACCTTCGACATCCTGATGCGCGAAGGCTTTGAAACCGAACATTACATCGACATCTTCGACGGCGGGCCGACCCTGCATGCCCGGGT CGCCAATATCCGTTCGATCGCCACTAGCCGGGTGGTGCCGGTGCGAATCGAGGAAACCGGCAAGGGCGGGCGGCCGTACCTGGTCGCCAATTGTCAGTTG CAGGACTACCGCGCTGCCCTGCTGGAGCTGGACTGGGCACCCGGCAAGCCGGTGGGCTTGCCCGCCGCGGTGGCCGAGCGCCTGGGTGTCGGTGAAGGCG CCAGCGTGCGCCTGGTGGCGGTGTAACAGCAAGGTGCACCGCCTGGCGCTGGCCAGGCGGACGATCGCGGCCCCTCAGCTGGGCCGCCCGAGGAGAAAGC
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| DNA Sequence for Gene |
>TD31_RS15100
ATGATTGTTCGTCCTGTACGCAGCAGCGACCTTAACGCGCTGATCGACCTGGCCCGTGGCACCGGCCCGGGCCTGACTACCTTGCCGGCCAATGAAGAGC GCCTTGGCCAGCGCGTGGAGTGGGCGCAGAAAAGCTTCCGTGGCGAAGCCGAGCGCGGGGATACCGACTACCTGTTCGTACTGGAAACCGACGACGGCAC CGTGGTGGGCACTTCGGCCATCGCCGGGGCGGTGGGGCAGCGCGAGCCTTGGTACAACTACCGGGTAGGCCTGACTGTCAGTGCATCCAAAGAACTGAAC ATCTACCGCGAGATTCCCACGCTCTTCCTGGCTAACGACCTGACCGGCAATTCAGAGCTGTGCTCGCTGTTCCTGCGGGACGACATGCGCAATGGCCTCA ACGGCCGCTTGCTGGCCAAGGCGCGGCTGCTGTTCATGGCCGAATACACCGCCCTGTTCGGCAAGAAGGTGATCGCCGAGCTACGCGGCATCTCCGACGA CCAGGGACGCTCGCCTTTCTGGGAAAGCCTGGGGCGTTATTTCTTCAAGATGGAGTTCAGTCAGGCGGACTACCTCACCGGCGTCGGCAACCGCGCGTTC ATCGCCGAGCTGATGCCCAAGTTCCCGCTTTATACCTGCTTCCTGTCGGAGGCCGCGCGCGGGGTGATCGGCAAGGTCCACCCTGATACCGAGCCGGCGC TTTCCATGCTCCGTGCCGAAGGCTTCAACTACCAGGGCTATGTGGACATCTTCGATGCCGGTCCCGCGGTGGAGTGCGAAGTCGCCAAGATCCGCGCCGT TCAGGAAAGCAAGACCCTGATACTGGCCGTGGGTACACCGGGCGATGACGCACCGGTGTATCTGATCCACAACCGTCAGCTCGAGCAGTGCCGTATTACC GCGGCACCGGCGCGGCTGGCCGCCGGCACCCTGGTGGTGGACCCACTTACCGCTCGGCGCCTGCGCCTTCACGCCGGCGACCAGGTGCGCGCGGTGCCCC TGTCACCCACTACGGCTCTGGAGGGCCAGGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CTACCCTGTTCATTGGCGGGCAATGGCTCGCAGGCGAAGGCGAGGTCTTCCAGTCCCTCGATCCCGTGGGCCAGCGGGTACTGTGGCAGGGCCAGGGGGC GTCGGCGGCCCAGGTTGACACAGCCGTGGCCGCCGCTCGCCAGGCCTTTCCTGCTTGGGCATCGCTGCCACTGGATGCCCGCATCGCTCACCTGCAAGCC TTCGCCGAGCGACTGAAGACTCGCGCGGATGACCTGGCGCGTTGCATCGGCGAGGAAACCGGCAAGCCGCTATGGGAAGCGGCCACCGAAGTCACCAGCA TGATCAACAAGGTGGCGATCTCGGTGCAGGCCTATCGCGAGCGTACGGGCGAGAAGCAAAGCGTGCTCGGCGATGCCAATGCGGTGCTACGCCACAAGCC TCACGGAGTGGTGGCCGTCTTCGGGCCGTACAACTTCCCGGGTCATCTGCCCAATGGGCATATCGTGCCGGCCTTGCTGGCCGGCAATACCGTGGTGTTT
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| Amino Acid Sequence |
>arginine N-succinyltransferase
MIVRPVRSSDLNALIDLARGTGPGLTTLPANEERLGQRVEWAQKSFRGEAERGDTDYLFVLETDDGTVVGTSAIAGAVGQREPWYNYRVGLTVSASKELN IYREIPTLFLANDLTGNSELCSLFLRDDMRNGLNGRLLAKARLLFMAEYTALFGKKVIAELRGISDDQGRSPFWESLGRYFFKMEFSQADYLTGVGNRAF IAELMPKFPLYTCFLSEAARGVIGKVHPDTEPALSMLRAEGFNYQGYVDIFDAGPAVECEVAKIRAVQESKTLILAVGTPGDDAPVYLIHNRQLEQCRIT AAPARLAAGTLVVDPLTARRLRLHAGDQVRAVPLSPTTALEGQA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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