Pseudomonas sp. CB1, TD31_RS14320

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CB1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGCCGGGCGATCGTTGCCGCCCGCCTGATCGACCCGGCCATGGCCTGGCCCATGGCTCGCGCCATCGGGCAGGCCTTCTACCGCGACGGCCTGGACGTG ACCCGTACCGCCGCCCTGGTGGATATCGCCGAGGCGGTGGGGCTTTCCCGCCTGCGCTTCGCCGACACCTTCGACCTGGCGCAGACCGCCGAGGCCACCC AGGCCGACTTCACTTGGTCACAGTCCTTGGGTATTTCTGGGTTCCCCACGGTGCTGGCCGAGCATGACCGCCAATACGCGTTGCTTACCAATGGCTACCA GTCGGCTGATGCCCTGGGGCCACTGCTGGCACGTTGGCTTGATCGCATCGCCGCGCTATAGTCGCGCGGTGCTGCGCCGTCCCTGACGGCAGCGTTGGCA CAGTGGGAGTGCTGCGCTGGCCGAGGCTGGAAACCTTGGCTGCGCTGTGCTGAATGTGTGCCGGGCCGCGTGGCTTGGCGTCTGCGCCTCAAAGGATCAC
DNA Sequence for Gene
>TD31_RS14320
ATGAAGCAGAAACGCACCCTGGAAACGCCAAGGCTGATCAGCATCGCGTGGCCGTTCATCGCTGTTGTACTGCTGCTGGCCCTGCTGGGATGCGTCAGCT TCTACGCACTGTCCGCCGTGCGGGGCTATGTGGCTGGCGAAAGCCTATGGTCCAAGGCGCAGAAGGATGCGATCTTCTACCTGAGCCTGTACGCGGATAA CCGCGACGAAGGCACCTATGCCAAATACCAGCAAGCGATGGCGGTGCCCGAGGGCAACCGAGAGCTGAGGGTGGCCCTGGAAAAGCCCGAGCCTGACATG ACCATGGCCCGCAAGGGGCTTCTGCAGGGCGGCAATCACCCGGAAGATTTCGACGGCATCATCTGGCTGTTCCTGAATTTCCGCCATATTTCCTATTTCG CCCGCGCCATGGACCTCTGGACCATTGGCGACAACTACCTGGATCAGCTCGACGCCATTGCCGGGCAGATGCATGACGCCATCGGCGGAGGCAGCGCCAC GGCGGCCGATACCTTGCGCTGGAAGCAGCAGATCGCTGCCCTGAATGAAGCAGTGACGCCGGCCGCCAAGGCCTTCAGTGATGCCCTGGGCGAGGGCAGC CGGGTGCTGCAGCGCTGGCTGGTCAGTACCAACCTGGTGACGGCGTTCCTGTTGATCGCGCTGGCCCTGTGGATCACCCGCAAGCTGCTGGTGCAGCGTC ATAGCATGGCCGAGGCGCTGCAACTGGAAAAGGAGCGTGCCCAGGTTACCCTGGCGTCCATCGGCGATGGGGTGATCGCTACCGACGTGACCGGCGCCAT CGCCTACATGAACCCGGCCGCCGAGCAGCTTACCCATTGGAAGGCCGAGCAGGCGGCGGGCTTGCCCCTGGCAGCCCTGTTCAACCTGCTGGACGAGCAT GCCGAGAAAGACGATTTCACCCTGATCGAGCGCATCCTCGGAGGGCAGCTCACCGGTGGCAGCGAGCATGCCAAGCTCATTCAGCGTCTGGACGGCAGCA CGGTCTCGGTGAATCTGGTAGGCGCGCCCATCCAGACCGACGGCCGCATCAGCGGGGCGGTACTGGTGCTGCACGACATGACCCAGGAGCGGCAGTACAT CGCCAACCTGTCCTGGCAAGCCAGCCATGATGCATTGACAGGCCTGGCCAACCGCCGGGAGTTCGAGCAGCGCCTGGAACAGGCCCTGACCCGTACCGCC AATGGGCGCGGGCGGCAGTCGCTGATGTTCCTTGACCTTGACCAGTTCAAGCTGGTGAACGATACCTGCGGCCATGCGGCAGGCGACGAACTGTTGCGAC ATATCTGCGCCGTATTGCAATCGTGCCTGCGGGAAACCGATACCCTGGCCCGCCTGGGCGGCGACGAGTTCGGCGTGCTGCTGGAAGATTGTCCGCCGGA CCAGGCCGAGCGCATCGCCGAACACCTGCGCGAGAGCGTGCACAGCCTGCACTTCGTCTGGAAGGGGCGGCCGTTCATGACCTCCGTGAGCATTGGCCTG GTGCACCTGAACCTGTTGCCAGCCACGTTGGAGCTGTCGTTGCGGGCCGCGGACATGGCCTGCTACATGGCCAAGGAAAAGGGGCGCAACCGGGTGCAGG TCTATCACGCCGAAGACTCCGAAGTGTCTACCCGCTTCGGCGAGATGGCCTGGATTCAACGGCTGCGCATGGCCCTGGAGGAAGACCGCTTTACCCTTTA TGCGCAGGAAATCGCCCTCTTGGCCAACGACCGCAACGGCGGCGGCCATGCTCGCCATGTGGAGATCCTGCTACGGCTGCATGATGAGCACGGGCGGATG ATTCTCCCGGACAGTTTCATCCCGGCCGCCGAGCGCTATGGCCTGATGACCGCCCTGGATCGCTGGGTAGTCAAGAATGTATTCAAGGTGATCCGCCAGG CCATGGACGAAAGCGGGGAAGAGCCGCTGGCCGTATGTGCTATCAATTTGTCCGGGATCAGTATCGGGGATGACGATTTCCTGGATTATCTTCGTGAGCA GTTCCGCCGGTTCGCCATTGCGCCGCACTTGATCTGCTTCGAAATCACCGAGACCAGTGCCATCTCGAACCTTGGCAGCGCCATTCGCTTCATCAACGAG CTCAAGGCCCTGGGTTGCCTGTTCTCACTCGATGATTTCTGCGCGGGCATGTCCTCGTTCGCCTACTTGAAGCACCTGCCGGTGGATTTCCTGAAGATCG ATGGCAGTTTTGTAAAGGACATGCTCGATGATCCCATCAACCGGGCCATGGTTGAGGTCATCAACCATATCGGCCACGTGATGGGCAAGCGTACCATCGC CGAATTCGTTGAAACGCCGCTGATCGAGCAGGCGCTCATGGAGATTGGCGTGGATTATGCACAAGGCTACGTGATCGAGCGGCCACGCTTGTTCACCTGC GAAAGCCTACGCTGCGCCGACGAAGTGCGTGCCACCCCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGCCTCCCTCGGGGAGGCAAGGGCAGCGAACCTTGCGGTAGTTTTTCACCAACAGAAAGGAAGTTGTCGATGAATGATGTAGCGGATTCAGGTTTCACTC GCACCGGCCCTCTGATGGAAGCATCCAGCTATCCGGCATGGGCCCAGCAACTGTTGCGTGATTGCAGCATTGCCAAGCGGCGCGTGGTGCAACATGAACT GTACCAGCGGATGCGAGACAACAAGCTCAGCGCCGGCACCATGCGCCAGTACCTGATTGGCGGCTGGCCCGTGGTGGAGCAGTTCTCGCTGTACATGGCT CATAACCTGACCAAGACCCGTTTCGGTCGCCATCCAGGCGAAGACATGGCGCGCCGCTGGTTGATGCGCAACATCCGAGTCGAACTGAACCATGCCGATT ACTGGGTCAACTGGTGCGCGGCTCACGGTGTGACCCTGGAAGACCTGCAGGCCCAGAAAGTGCCGCCGGAGCTGCAATCGCTCAGCCATTGGTGCTGGCA
Amino Acid Sequence
>membrane protein
MKQKRTLETPRLISIAWPFIAVVLLLALLGCVSFYALSAVRGYVAGESLWSKAQKDAIFYLSLYADNRDEGTYAKYQQAMAVPEGNRELRVALEKPEPDM TMARKGLLQGGNHPEDFDGIIWLFLNFRHISYFARAMDLWTIGDNYLDQLDAIAGQMHDAIGGGSATAADTLRWKQQIAALNEAVTPAAKAFSDALGEGS RVLQRWLVSTNLVTAFLLIALALWITRKLLVQRHSMAEALQLEKERAQVTLASIGDGVIATDVTGAIAYMNPAAEQLTHWKAEQAAGLPLAALFNLLDEH AEKDDFTLIERILGGQLTGGSEHAKLIQRLDGSTVSVNLVGAPIQTDGRISGAVLVLHDMTQERQYIANLSWQASHDALTGLANRREFEQRLEQALTRTA NGRGRQSLMFLDLDQFKLVNDTCGHAAGDELLRHICAVLQSCLRETDTLARLGGDEFGVLLEDCPPDQAERIAEHLRESVHSLHFVWKGRPFMTSVSIGL VHLNLLPATLELSLRAADMACYMAKEKGRNRVQVYHAEDSEVSTRFGEMAWIQRLRMALEEDRFTLYAQEIALLANDRNGGGHARHVEILLRLHDEHGRM ILPDSFIPAAERYGLMTALDRWVVKNVFKVIRQAMDESGEEPLAVCAINLSGISIGDDDFLDYLREQFRRFAIAPHLICFEITETSAISNLGSAIRFINE LKALGCLFSLDDFCAGMSSFAYLKHLPVDFLKIDGSFVKDMLDDPINRAMVEVINHIGHVMGKRTIAEFVETPLIEQALMEIGVDYAQGYVIERPRLFTC ESLRCADEVRATP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site