Pseudomonas sp. CB1, TD31_RS13980

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CB1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCTGCCTGGACTGTTCGGCGTGGCGTTGCGCCTCGGCGTCCGCTTCGGCCCGCCGCGCGCGGCCTGCCCGTTCGATGGGCCAGCGCACCAGGACGAACAA CAGATACAGCGCCAGGGCGATAGCGGCGTACATGGCCAGGTCCGATACCGCGCGCCAGGCATTACCCGCCACCTTGAAAAGTAGATCGAGCGCGGTAATG GCGATGGCCGGCGCGAACTTGTCCTGGGCCGGGTCCACAATGGTAGGGCTGAACAGCGCCACCGCGCCCACTACCCGCAAGGGCTCGCGCAACCAGCGCC ACAGCCAGCGCGTCAGGCGGAACCACACAAGCAGGCAGCCCAGGGCAGCGAAGGCATACAGCCCCCAGGCGATGTAATAGTCGTTCTCGGTCATGGTGTT CGTGGCAAGGCGGCAAAGTGACGCTTATGATAACGGCTTTTGGCCCCAGGCGCAGTGCCGCCGGCCAGCGCGCTGCGCGCCACCGAACCGAGGACCCGCC
DNA Sequence for Gene
>TD31_RS13980
ATGACCCAGCCCCAGCCCCCGATTGCCCGCAAGGCGCCTGGCAGCGACCCCTACGCCTGGCTGCAGGCGCGTGACAGCGAAAAGGTGCTGGCCCACCTGC GGGCCGAAAATGCCTACATGGAAGCCTGCCTGGCCAACGAAGCGCCTTTGCGCGAGGCCTTGTTCGAAGAGATCCGCGGTCGCATCCAGGAAACCGACCT CAGCCTTCCTTCTCCGTGGGGCCCCTGGCTGTATTACTCCCGAACCACCGCTGGCGACGAATACGCGCGGCATTACCGGGCGCCGCGGCCTGCGGACGGC TCCCTGGACGTAGCGCCGGAAAGCGAAATCCTTCTGCTCGACCCTAACGCCCTGGCCAACGGGGGCTATCTCTCCCTGGGCGCTTTCAGCGTCAGCCCGG ATCACCAGCGCCTGGCCTACAGCCTGGACACTCAGGGCGATGAAACCTACCAGCTGTTCGTCAAGGACCTGTCCAGCGGTGACATACAGGCACTGCCGTT CGAGGCCTGTTCGGGCAGCATGACCTGGGCCAACGACAGCGCGACGCTGTTCTTCGTCGTTCATGACGATACCCATCGCCCCTATCGTCTGTATCGGCAT CGGCTCGGCGAGACGGGCGCCACTCTGGTGTTCGAAGAGCCCGATGGTCGTTTCTTCCTGCATTGCTACCGGGCCAGCTCCGAGCGCCAACTGGTGCTGC ACATCAACAGCAAGACCACGGCGCAGGCCTGGGTACTGCCGGCGGACAAGCCTGAGGGCAGCTTCGCCTGCGTGGCCGAACGTCGCGAGGGCCACGACTA CGACCTGGACCACGGGCAGTTGGAAGGCACCTGGACCTGGTTCATCCGCAGTAACCGTGACGGGCTCAATTTCGCCCTCTACCACTGCCCGGATACGGGC GAGCCGCCCCGCGAGGCGGGTTGGCAGACACTGGTGCCTCATGATCCGGAAGTGATGCTCGAGGGCTTCACGCTGAACCATAGGGCCTACGTGCTCAGCC TGCGCCAGGCCGGGCTGCCGATCGTGCAGGTGTTCCCCGTCGGCGCCGATGCCTACCGGGTGCAACTGCCCGACGCCGCCTACAGCCTCTACGTGCAGGA CAGCCTGGAATACCAGGGCGAGTACATTCGCCTGCGCTACGAAGCCCTCAACCGTCCTGGCCAGGTGCGCCAGCTCAGCCTGGCCGATGGTGCGCAGGTA GTGCTCAAGCAAACCCCGGTGCTGGGCGCCTTCGACGCGGATGACTACCTCAGCGAGCGCCTGTGGGCGACCGCCACCGATGGCACCCGGGTGCCGGTGA CGCTGGTGCGCCGCAAGGATCGCATCGGCGGGCCGATGCCGCTGTACCTGTACGGCTATGGCGCCTATGGCGAGAGCCTGGACCCCTGGTTTTCCCACGG GCGGCTCAGCCTGCTGGACCGTGGCGTGGCCTTCGCCATCGCCCACGTGCGCGGTGGCGGCGAGCTGGGCGAGCAGTGGTACCAGGCCGGCAAGCAGGCC AACAAGCCCAACAGCTTCACGGACTTCATCGCCTGCGCCGAACACCTGATCGGGCAAGGCATCACCGCGCCTGATCGCCTGGTGATCAGTGGCGGCAGCG CCGGCGGCCTGTTGATGGGCGCGGTGCTGAACCTGCGGCCCGACCTGTTCACTGCCGCCATCGCCGAGGTGCCCTTCGTCGATACCCTCAACACCATGCT TGACCCGGACCTGCCGCTGACCGTGACCGAATACGACGAGTGGGGCAACCCGGCGGACCCGGACGTGTATGCGCGCATCAAAGCCTATGCGCCCTATGAA AACGTGAGGGCCCAGGCGTATCCGCATATGCTGGTGATAGCCGGCTACAACGACAGCCGAGTCGCCTACTGGGAAGCGGCCAAATGGGTGGCGCGGCTGC GCGAACTCAAGACCGACGACCATCTGCTGCTGCTCAAGACCGAAATGGGCGCCGGCCATGGTGGCATGAGTGGCCGTTACCAGGGGCTGCGTGACCTGGC CCTGGAATATGGCTTTGTGTTCAAGGTGCTGAACCTGGTGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACAACCTTCAATAGAAAGCGAAGATATCGACCATGACCAATGCCGCCTCGTTGAACAATGAAATCCGCATCATGTTGATGGACTGCGGCCTGTTCAACCA GCTTCAGCCCGAGGACTGCGGCATTGCCGCCGGGTATTTCAGCATCGTCTCGATGGAAAAGGGCACGCTCATCTTCAACGAAGGCGACGCGGGCACTTTC ATGTGCATCATCCACTACGGCAACGTTTCGGTCAGCAAGACCGATGCCGAGGGCAACCAGGTTGACATTGCCTTGCTGCGCAAGGGGCGTTCGTTCGGCG AAATGGCCGTGCTCGATGGCGAACGCCGTTCCGCCACCTGCGTAGCCGCCACGGACTGCCAACTGCTGAGCCTGGGCAAGGACTCGCTGGAGAAGATGAT GGTCGAGGCGCCCAAGGTGGCTGCCAAGCTGATCCGCGCCCTGGCGGTGTCGCTGTCCAAGCGGCTTCGCATGGCGGACGGGCAGCGACTCTCCTGACCG
Amino Acid Sequence
>peptidase S9
MTQPQPPIARKAPGSDPYAWLQARDSEKVLAHLRAENAYMEACLANEAPLREALFEEIRGRIQETDLSLPSPWGPWLYYSRTTAGDEYARHYRAPRPADG SLDVAPESEILLLDPNALANGGYLSLGAFSVSPDHQRLAYSLDTQGDETYQLFVKDLSSGDIQALPFEACSGSMTWANDSATLFFVVHDDTHRPYRLYRH RLGETGATLVFEEPDGRFFLHCYRASSERQLVLHINSKTTAQAWVLPADKPEGSFACVAERREGHDYDLDHGQLEGTWTWFIRSNRDGLNFALYHCPDTG EPPREAGWQTLVPHDPEVMLEGFTLNHRAYVLSLRQAGLPIVQVFPVGADAYRVQLPDAAYSLYVQDSLEYQGEYIRLRYEALNRPGQVRQLSLADGAQV VLKQTPVLGAFDADDYLSERLWATATDGTRVPVTLVRRKDRIGGPMPLYLYGYGAYGESLDPWFSHGRLSLLDRGVAFAIAHVRGGGELGEQWYQAGKQA NKPNSFTDFIACAEHLIGQGITAPDRLVISGGSAGGLLMGAVLNLRPDLFTAAIAEVPFVDTLNTMLDPDLPLTVTEYDEWGNPADPDVYARIKAYAPYE NVRAQAYPHMLVIAGYNDSRVAYWEAAKWVARLRELKTDDHLLLLKTEMGAGHGGMSGRYQGLRDLALEYGFVFKVLNLV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site