Pseudomonas sp. CB1, TD31_RS11315
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. CB1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAAGCGCAGGCATTGAAGCGGCTATGCGAAAGCTACGATACGCAGCTGATCATCAACGACGACGCCGAGCTGGCGGCTCGCATTGGCGTGGGTGTTCACC TGGGGCAAACCGATGGTCCGCTCACCGCGGCTCGCAGCCTATTGGGCCCCCGAGCGATCATTGGCGCCACCTGCCATGCCAGTCTTGGACTGGCTGATCA GGCAGCCAATGAAGGCGCCAGCTACGTAGCGTTCGGCCGCTTCTATAACTCCCACACCAAACCTGGTGCGCCCTCGGCCAGCCTCGAGCTGCTCAGCGAG GCGCGTCGCCAGTTGCGCCTGCCCATTTGCGCCATTGGCGGCGTAACCCTGGAGAACGCGCCTGACCTGGTAGAGCGAGGCGCGGACCTGCTCGCCGTGG TACATGCCCTGTTCGCCGCCGACAGCGCCTCGGAAGTCACCCGCCGCGCCCTAGCCTTCAATGCGCTGCTGCGCACCTGAACCCGATTGAGAGAACGCCC
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| DNA Sequence for Gene |
>TD31_RS11315
ATGTCCCGCTCTGAAAACCTCTTCGCCGCCGCCCAGAAACATATTCCCGGGGGTGTCAACTCACCCGTGCGCGCCTTCAAAAGCGTGGGCGGCACACCGA TCTTCTTCAAGCATGCCGCCGGGGCCTATGTCACCGACGAGGATGACAAGCGCTATGTGGACTACGTTGGCTCCTGGGGCCCGATGATCCTCGGCCATAG CCATCCTGCGGTACTCCAGGCTGTGCGCGAGCAGCTGGAGCATGGCTTGTCCTATGGCGCGCCCACGGAAATGGAAACCCGCATGGCCGAGCGTGTCTGT GCCTTGGTGCCTTCCATGGAAATGGTGCGCATGGTCAGCTCGGGTACCGAGGCCACCATGAGTGCGATCCGCCTGGCTCGCGGCTATACCCGGCGCGACA GCATCATCAAGTTCGAAGGTTGCTACCACGGGCACTCCGACAGCCTGCTGGTCAAGGCAGGCAGCGGCGCTCTTACCCTGGGCGTTCCGAGTTCCCCCGG GGTGCCCGCAGCCTTCGCCCGGCATACCCTTACCCTGCCGTTCAACGACCTGGAAGAGGTGGAGCGCACCCTGGCCGAGGTAGGCAATGAAGTGGCCTGC ATCATCGTGGAGCCCGTAGCGGGCAACATGAACTGTGTGCCCCCCGCGCCCGGCTTCCTGGAAGGGCTGCGCGAACTGTGCAACCGGCATGGCGTGGTGC TGATCTTCGACGAAGTCATGACCGGCTTCCGAGTGGCCCTGGGCGGCGCCCAGGCGTTCTATGGCGTAACCCCGGACCTGTCCACCTTCGGCAAGATCAT CGGCGGCGGCATGCCGGTGGGCTGCTTCGGTGGCAAACGGGAAATCATGTCCCATATCGCGCCGCTGGGCCCGGTGTACCAGGCAGGCACCCTTTCGGGC AACCCGCTGGCCATGGCCGCCGGGCTCACTACCCTCGAGCTGATCAGCCGGCCTGGCTTCCATGACGAGCTCACCGCCTATACCAGCAGCCTGCTCGACG GTCTGCAGCAGCGCGCCGATGCCGCGCAGATTCCCTTCGTGACTACCCAGGCCGGGGGCATGTTCGGCCTCTATTTCAGCGGCGCCGACGATATCGTTAC CTTCCAGGACGTGATGGACAGTGACGCGGAACGATTCAAGCGCTTCTTCCATCTGATGCTGGACGGCGGCGTTTACCTGGCGCCAAGCGCGTACGAAGCA GGCTTCACCTCCATCGCCCATGGCGAAGCGGAACTGAAGATCACCCTGGATGCGGCCGAACGCGCCTTCGCCCAGCTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCGCGCGGCCTGTGTCATATCGATGACATGGGCCGCTCCCTGTCCATGGGAAAAATCCGAGTAAAGACTTTGTAAGGTGTCATCGGCTTATTTCATAAT GTGCGCATTGTTATCCCGAGGGTGGCCAAGCCCACCCGCTCAGAGGTAAATCGATCCCCATGAACCGCACCGGCCGCGCCCTGGCCTTGGGCTGCCTGCT GCTTCTCGAACCCTTGCTGGCCGCGGCGGACGGTAACTCGTTGCTGGTGCCCGCGCCCAGCCGCTGCAGCCTGGACAGCGCGCCGGCCGACTTGCCCCAG GCCCTTGCCGCCTGCCAGCAGGCCGCTTCGGGAGGGGATGGACAGGCGCAATACGAATTGGGGCGGTTCTACTATGAAGGCAAGCAGACCGAGCGCGACC TGAACCAGGCCCTGAACTACTTCGAGCAAGCCTCGCTAAAGGGCCACGCCCACGCCCAGTATCATCTTGGGCTGATGTTCTACCGAGGCGAAGGCGTGCC
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| Amino Acid Sequence |
>glutamate-1-semialdehyde 2,1-aminomutase
MSRSENLFAAAQKHIPGGVNSPVRAFKSVGGTPIFFKHAAGAYVTDEDDKRYVDYVGSWGPMILGHSHPAVLQAVREQLEHGLSYGAPTEMETRMAERVC ALVPSMEMVRMVSSGTEATMSAIRLARGYTRRDSIIKFEGCYHGHSDSLLVKAGSGALTLGVPSSPGVPAAFARHTLTLPFNDLEEVERTLAEVGNEVAC IIVEPVAGNMNCVPPAPGFLEGLRELCNRHGVVLIFDEVMTGFRVALGGAQAFYGVTPDLSTFGKIIGGGMPVGCFGGKREIMSHIAPLGPVYQAGTLSG NPLAMAAGLTTLELISRPGFHDELTAYTSSLLDGLQQRADAAQIPFVTTQAGGMFGLYFSGADDIVTFQDVMDSDAERFKRFFHLMLDGGVYLAPSAYEA GFTSIAHGEAELKITLDAAERAFAQL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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