Pseudomonas sp. CB1, TD31_RS10360

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CB1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GACCCCCGCTCATGCCAGGGCCGAAACCCTGGCCGAGCAGCCGATGTTTCGCGAAGCCTTTCGCGCCCGGCGCTGCCTGGTGCCGGCCAATGGCTTTTAC GAATGGCGGGGGGCGGTGCGCAAGCGGCCTTACTGGCTCACTCCCGCCCAAGGCTCGTTTCTCTATTTCGCTGCCGTCTGGGAGGCTTTTCCTGTGCAGG AGCAGGTGTGGTTGAGCATGGCCATCGTCACCCAGGCCGCGGCCAGCCAGCGCCGCCCCATCATTCTGGACGAGGCGGGCCAGGCCGCCTGGCTGGACCC TGACATGCCCTTGCCCCGGCTGCATTCGTTGCTGGCCCAGCCGCCAGCGCCGCTGTTGGAGCGGCCGCTGGCCAACCTGGTCAACGATCCCAAGCTCAAT GCCCCGGAGTGCCTGACGCCGGCAGTGTGAAAGCCGCACATTGTGTCCAGCCTGTTACCTTGCTGCTAGCATGGCGCTCTGTAGCCACAGGGAGCCTTCC
DNA Sequence for Gene
>TD31_RS10360
ATGCGCAAACCGTTCATCCTCTCCGTCCTGGCCAGCAGCCTGCTGCTCGTGGCCTGCCAGGCGGTCAATACCACCAGCGGCGACGCCGTAGGCGTGGAGC GCAAGCAATACATGTTCAGCATGCTCTCCACCGAGCAGGTGAACCAGATGTACGCCCAGTCCTATCAGCAGACCCTGTCCGAGGCTTCAGGCAAGGGTGT GCTGGACAAGGGCAGCAGTGAAGCCAAGCGGGTGCAGGCGGTGGCTGACCGCCTGATTGCCCAGGCCCCGAGACTGCGACCGGACGCGGCTCAGTGGAAC TGGGAAGTGAATGTGATCAAGAGCGATGAGCTCAACGCCAACTGCGGGCCTGGCGGGAAAATCATCGTGTACACCGGCCTGATCGACACCCTCAAGCTCA GCGATGACGAACTGGCCGCAGTGATGGGGCATGAAATCGCCCACGCCTTGCGCGAGCATGGTCGGGAGGCCATGTCCAAGGCCTATGGCATCGAAATGGC CCGTACGGGCGCGGGGGCGTTGCTGGGATTGAGCCAGGACAGCCTGGCTCTGGCCGATACCGTGGTGCAATACAGTCTTACTCTGCCCAACAGCCGCGCC AATGAAAACGAAGCGGACCTGCTGGGCCTGGAACTGGCGGCCCGGGCAGGCTATGACCCCAATGCGGCCATCAGCCTGTGGAAAAAAATGACCGCGGCCG AGTCGGGCAGCGCACCGCCCGAATTCACCAGTACCCACCCTTCCAGCGCCAATCGCATCGCCGCGCTGGAAGCCGCCATTCCCAAGGTTCAGCCCCTGTA CCAGGCGGCCCGCAAAAGTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACCCAGCCGCTGACCTTCATTGCTTCATAGACGGCGAACGCGGCCAGTACGAAGAAGGACAGGGCCGCCAGCCGGCGGATGAGGGTCAGCGGCAGCTTGT CGGCGGCAAAGTTGCCGGCGAGCACCACGGGCACGTTGGCGGCCAGCATGCCGAGGGTGGTACCGATGATGACCAGGATCAGATGCGGATATTGCGCCGC CAGCATTACCGTGGCGACCTGGGTCTTGTCACCGATCTCGGCCAGGAAGAAAGCGATCAAGGTGGTGACGAACGCGCCATGGGCCTTGCTGGTGCGGGTC TCATCGTCGTCGATCTTGTCAGGCACCAGAGTCCACAGGGCGGTGGCGGTGAAGCTGGCGGCCAGTATCCAGTGCAGGACGGTATCGGACAGGTAGCTGC TGACCAGGGCACCGACGGCGCCTGCCGCGGCATGGTTGGCCAGGGTAGCGGCGATGATCCCGGCGATGATCGGCCAGGGCTTGCGAAAACGCGCGGCCAG
Amino Acid Sequence
>peptidase M48
MRKPFILSVLASSLLLVACQAVNTTSGDAVGVERKQYMFSMLSTEQVNQMYAQSYQQTLSEASGKGVLDKGSSEAKRVQAVADRLIAQAPRLRPDAAQWN WEVNVIKSDELNANCGPGGKIIVYTGLIDTLKLSDDELAAVMGHEIAHALREHGREAMSKAYGIEMARTGAGALLGLSQDSLALADTVVQYSLTLPNSRA NENEADLLGLELAARAGYDPNAAISLWKKMTAAESGSAPPEFTSTHPSSANRIAALEAAIPKVQPLYQAARKS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site