Pseudomonas sp. CB1, TD31_RS10075

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CB1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AAGGTGGTGCTGCCGGATGCCGCCAAGGCCGAGGAGCACCTGAAGAAGGCCACCCCGGACCAGGTCAGCGCCTACTACTACCTGGGCCAGATTTACCGCC GTGGCTACCTGGGCATGGTCGAGCCGCAGAAGGCCGTCGACAACCTGCTCATCGCTGCCCGGCGCGGCCAGAACAGCGCGGACTTCGCCCTGGCGCAGTT GTATTTCAACGGCCGTGGCACCGTGCCGAACCCTGCCAATGCATACGTGTTCAGCCAACTGGCCAAGACCCAGGCGCTGGCTACTCCGCAGCCGCGTCAG GAAGTCCTGGACCTGGCTAAAACCGTCGAAGAACAACTACCGCCGCAGCTCAAGCCTCAGGCTCAGCGCCTGTTGCAGCAGGAAGTCGCCTCGCGCGGCG TGGCCCCGGCCCCTGGCATCACCTCCATGGTGCCGCAGGACGATGTCGCGCCAGAGAAGGACGACCCGCAACAGATAGCCGTCGGTGAAGGTGAAGATCT
DNA Sequence for Gene
>TD31_RS10075
ATGATCCTGAATAAATGGACCCTGGCCGGCATTGGCCTGGGCTTTGCGACACTTTGGTCGTGCCCGACCCTGGCGGCCCTGACCGCCACCGATAACTTCG GCCTGGAAGTGAAGATCACCGGCCAGTCCGAAGACGACCGTGACCTGGGCACTCGCTCCGGCGGCGACGTCACCGGTATCGGTATCGACCTGCGTCCCTG GGCTTATGGCCAGTGGGGCAACTGGAGCGCCTATTTCATGGGCCAGGCCGTGGCCGCGTCGGACACCATCCAGACCGACCCTCTGCTGCAGCCGGACGAC AACGTCTCCGGATCGAGCAACAGCCGCTACTACAGCAAGGACCGCGAAGCCGACGACAGCTATCTGGCCCTGCGCGAGTTCTGGGTTGGCTACAACCGTC TGCTCACGCCTTACCCTGGCGAGCAGGTCAAGTTCGGCCGTCAGCGCCTGCGCCAGGACGACGGTCAATGGCACGACAACTATATCGAGTCCCTGACCTG GAACCTGGACACCACCCTGCTCAAGGCAGACGTGGGCGTGGGCCAGCGCTTCAGCGACTACCGTACCGACTACTCGCGCCTGTCGCCCAACGACAAGGAC CGCACCCATGTCTGGGGCGATGTTTCCTACCAGTGGGCGCCAAGCCAGTGGGTAGGCCTGCGTGCTCACCACGTGCATGACGACGGTGAACTGGCCAATG CTGGCGAGGAAATCGACGACCTGGACAAGACCAGCAACGGCAACCTGACCTGGGTTGGCCTGGAAGCGACCAGCGATGCCTACAACCATCGCAACACCAA CCAGCTCAACTACTGGGGTAGCCTGACCTGGCTGACCGGCAACCGGGATACCTTCAACCGTACCGACACCGACGGCATCGTTACCGCCGGGGATACCTAC GGCGAGCATGTCAGCGGCTGGGCCACCGACCTGGGTGTGCGCTGGCGCCTGGACCCGCAATGGCAAGTAGGCGCCGCCTACGCCCGGGCCAGCAAGGAAT ACGAGCAGAACGGCCTGCAGAGCAACCGCTCCAGCTGGACCGGTACCCGCTCGCGCATCAGCCGTTTCGGCGAAGCCTTCCAGGCTGAACTGGCCAACGT GCAGACCGCCTCGGTGTTCGCTTCCTGGGAAATGCAGGAAGACTACGATGCCAGCCTGATCTACCACCGTTTCTGGCGGGTAGACGGTGACTCGGCCATT GGTGGCAGCAACATCAACGCCGCCTACGAATCTACCGACGCTACCTCCGGTGACATTTCGCTGTCCACCTTGCCGCTCAACGACGGCGAGAAGGACCTGG GCCAGGAAGTCGATCTGGTTGTAACCAAGTACTTCAAGCAGGGCCTGCTGCCGGCCAGCCTGAGTCAATCCTTCGATGAGCCTTCCGCGCTGGTTCGCCT GCGTGCCGGTGTGTTCAAGCCGGGCGACGCCTATGCCGGCAGCGTGGACAACTATATGCACCGGGCCATCGTCGACGTGATCTGGCGTTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGGTACCGCCAAGGGAGTGCAATGAGATGAAGCATCCACATAGCAAGGTGCGGCCGCAGGTGCGCAAGCGCGCCTGGCCCGTTGCGCTGCTGGCCGCAG CCCTGCTGGTCGCCGGCGGCACCGCCCTGGCCAACACCGCGCCGGCGACCCAGGCCGCCGCGGCCAAGCCCGGTACCACCAAGGAGCTGCAGGTCGCCAA GACCTACAGCGTCGCCTCCGCGCCCACCGAGCCGTTGAACCTGGCGGCGCCCAAGCTGCCCGACCTCAGCGGCTACACCGCTGCCGCCGCGCATGCCAAG GTGGACCGCAGCAAGAAGGGCAAGGTGGCCATGCGTCGCATGATGCAGGAACTGCCGCTCAAGGCCTTCATCGGCGGCGACAACAAGATGATGGCCTGGG TCGGGAAGCAGCGCGGCATCCCGCAGGCGATCTTCATCGACGGCGGCTATGTCAACTTCGCTGACCTTGGCAAGACCGTGCCCAAACAGTACCTGCGCGA
Amino Acid Sequence
>alginate regulatory protein
MILNKWTLAGIGLGFATLWSCPTLAALTATDNFGLEVKITGQSEDDRDLGTRSGGDVTGIGIDLRPWAYGQWGNWSAYFMGQAVAASDTIQTDPLLQPDD NVSGSSNSRYYSKDREADDSYLALREFWVGYNRLLTPYPGEQVKFGRQRLRQDDGQWHDNYIESLTWNLDTTLLKADVGVGQRFSDYRTDYSRLSPNDKD RTHVWGDVSYQWAPSQWVGLRAHHVHDDGELANAGEEIDDLDKTSNGNLTWVGLEATSDAYNHRNTNQLNYWGSLTWLTGNRDTFNRTDTDGIVTAGDTY GEHVSGWATDLGVRWRLDPQWQVGAAYARASKEYEQNGLQSNRSSWTGTRSRISRFGEAFQAELANVQTASVFASWEMQEDYDASLIYHRFWRVDGDSAI GGSNINAAYESTDATSGDISLSTLPLNDGEKDLGQEVDLVVTKYFKQGLLPASLSQSFDEPSALVRLRAGVFKPGDAYAGSVDNYMHRAIVDVIWRF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site