Pseudomonas sp. CB1, TD31_RS10000

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CB1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATCCTTGCTGTTCGGCGCGCCCTTCCACTGGGAGGTGCCGGCCCTGCGCGGCTTCAACTTCGTGGGCGGCTGGGTGATGATCCCCGAATTGCTCGCGCTG ACCCTGGCGCTGACGGTCTATACCGCGGCCTTCATCGCCGAGATCGTGCGTTCGGGCATCAAGTCGGTCAGCCATGGGCAGACCGAGGCCGCGCGCTCCT TGGGCCTGCGCAACGGGCCTACCCTGCGCAAGGTGATCATTCCCCAGGCGCTGCGGGTGATCATTCCGCCCCTGACCAGCCAATACCTGAACCTGGCGAA GAACTCCTCCCTGGCGGCCGGCATCGGCTATCCGGAAATGGTCTCGCTGTTCGCCGGTACCGTGCTGAACCAGACGGGCCAAGCCATCGAAGTCATCGCC ATCACCATGAGCGTGTACCTGGCCATCAGCATCAGCATTTCCCTGCTGATGAACTGGTACAACAAGCGCATCGCGCTGATCGAGCGCTAGGATTTTCCCC
DNA Sequence for Gene
>TD31_RS10000
ATGACGACACATGTGTTCAAACCCGACCAGCCGCCACCCGTGAAAGCGGTAGGCGCCTGGGCCTGGATGCGCGCCAACCTGTTCTCAGGCTGGTTCAATA CCCTGCTGACGCTGTTGGCGGTATACCTTGTCTGGCTCATCGTGCCACCGGTACTGAACTGGGCCATCTTCGACGCCAATTGGGTAGGCACTGTCCGTGC CGACTGCACCAAGGAGGGCGCCTGCTGGGTGTTCATCCAGCAACGCCTGGGCCAGTTCATGTACGGCTATTACCCCAGTGACCTGCGCTGGCGGGTAGAC CTTACCGTCTGGCTGGCCATACTGGGCGCTGCGCCGCTGTTCATTCCCAAGGTGCCGAAGAAGGTCAAGTACGGCATCGCGTTCCTGGTGGTCTACCCGA TCATTGCCTGGTGCCTGCTGCATGGCGGCGTGCTTGGCCTGGACACGGTGCCGACCAGCCAGTGGGGCGGCCTGATGCTGACCCTGGTGATCGCCACCGT GGGTATCGCCGGGGCCTTGCCGCTGGGGATCCTGCTGGCGCTAGGCCGGCGTTCGAAGATGCCGGCAGTGAAGGTGGTATGCGTGACCTTCATCGAGTTC TGGCGTGGCGTGCCACTGATCACCGTTCTGTTCATGTCCTCGGTGATGCTGCCGCTGTTCCTTCCCGAAGGGATGAACTTCGACAAGCTGCTACGGGCAT TGATCGGGGTGATCCTGTTCCAGTCGGCCTATGTGGCCGAGGTAGTGCGTGGCGGCATGCAAGCCATTCCCAAGGGCCAGTACGAAGCAGCTGCGGCCAT GGGCCTGGGCTACTGGCGCAGCATGGGGCTGGTGGTATTGCCGCAAGCCCTCAAGCTGGTGATTCCGGGCCTGGTCAATACCTTCATCGCTCTGTTCAAG GACACCAGCCTGGTGATCATCATTGGCCTGTTCGACCTGCTCAACAGCGTCAAGCAAGCCGCCGCCGACCCTAAATGGCTCGGCATGGCCACCGAGGGCT ACGTTTTCGCCGCCCTGGTGTTCTGGATTTTCTGTTTCGGCATGTCCCGCTACTCCATTCATCTGGAACGCAAGCTGGACACCGGTCATAAGCGCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGTCAGGAGAGAACATGAACGACCCCATCAAGCAAGTCGCCGGCGCTGAAGGCATCATTCGCATGACCGGTGTGAACAAGTGGTACGGACAGTTCCACG TGCTCAAGGACATCAACCTCAACGTTCGCCAGGGCGAGCGGATCGTGCTTTGCGGCCCGTCCGGCTCGGGCAAGTCCACTACCATTCGCTGCATCAACCG CCTCGAGGAGCATCAGCAGGGCAGCATCATCGTCGATGGCGTGGAGCTGACCAACGACCTCAAGCAGATCGAGGCCATCCGCCGAGAAGTCGGCATGGTG TTCCAGCACTTCAACCTGTTCCCTCACCTGACCATCCTGCAGAACTGCACCCTGGCACCCATGTGGGTGCGCAAGATGCCGAAGCGCCAGGCCGAGGAGA TCGCCATGCACTACCTGGAGCGGGTTCGCATCCCGGAGCAGGCGCACAAGTTCCCTGGGCAGCTTTCCGGCGGCCAGCAGCAGCGCGTGGCCATCGCCCG
Amino Acid Sequence
>amino acid ABC transporter permease
MTTHVFKPDQPPPVKAVGAWAWMRANLFSGWFNTLLTLLAVYLVWLIVPPVLNWAIFDANWVGTVRADCTKEGACWVFIQQRLGQFMYGYYPSDLRWRVD LTVWLAILGAAPLFIPKVPKKVKYGIAFLVVYPIIAWCLLHGGVLGLDTVPTSQWGGLMLTLVIATVGIAGALPLGILLALGRRSKMPAVKVVCVTFIEF WRGVPLITVLFMSSVMLPLFLPEGMNFDKLLRALIGVILFQSAYVAEVVRGGMQAIPKGQYEAAAAMGLGYWRSMGLVVLPQALKLVIPGLVNTFIALFK DTSLVIIIGLFDLLNSVKQAAADPKWLGMATEGYVFAALVFWIFCFGMSRYSIHLERKLDTGHKR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site