Pseudomonas sp. CB1, TD31_RS09265

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CB1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCTTGCCCTGGTAGGAGAACCGCGTGGTACCGTCCGGCATCAACCCCTTGCCCTGGGTGCCACGGATGGCCTGGCAGAGGTTGGTCTTGCCGGAAAGGC AGAACTTGCATTGCCGGCACTCTGGGGTATACAGCGGGATTACATGATCACCCACCGCTACCGAGGTCACCCCCTCGCCTACCGCTTCGACGATGGCGCC ACCTTCATGACCCAGCACGGACGGGAAGATGCCTTCCGGATCCGCGCCGGACAGGGTATAGGCGTCTGTATGGCAAACACCGGTAGCAACCACACGCAGC AAGACTTCACCCGCCTTGGGCAGAGCGACGTCGATTTCGACGATCTCCAGCGGTTTTTTCGCTTCGAAGGCGACAGCGGCACGGGATTTGATCATGGGGC TTCCTCGATTCGAATTTCAACGATGAGGACAGTGTAATTCAGGCCCTATGCAGGGATAATCCGTCCTTTCAGAAAACATTATTGCAGGTCAGGGATAATC
DNA Sequence for Gene
>TD31_RS09265
GTGAGCGCAGGTTGGGAGGGTATCGATGAATTCGTAGCGGTGGCCGAACATGGTCAGTTCAGCGCCGCTGCATCAACCCTGGGCGTGTCTTCGTCCCATG TCAGCCGCCAGGTCGCGATGCTGGAAGATCGCCTCCAGGCTCGTCTGTTTTATCGCAGCACCCGACGAGTCAGCCTGACAGAGGCGGGTCATACCTTCCT GCAGCATTGCCGACGCTTGCATGATGGCCGAGACGAGGCTTTGCGCGCGGTACATGACCTGGCCAGCGAGCCCAAGGGCCTGCTGCGCATGACTTGCGCG GTCGCCTATGGAGAGCGCTTCATCGTGCCTCTGGTCAGCGACTATCAACAGCGTTACCCCCGATTGCAGCTGGATATCGAACTGACCAACCGAACGCTGG ACCTGGTCGACGAAGGGCTGGACCTGGCGATCCGGCTGGGTCGCCTACAGGACTCCCGGCTGGTTGCCCATCGCCTGGCTCCGCGCCGGATGTATCTTTG CGCTTCACCGGCTTACCTGGAGCGCTACGGGCGGCCGCACAGCCTTTCGGAACTGGCGCGGCACAACTGCCTGGTGGGCAGTTCAGACCAATGGCAGATG CTGCAGGAAGCCAGGGAGATCAATGTGCGGGTCAGCGGTAACTGGCGATGCAACAGTGGCCAGGCGGTTCTCGATGCCGCGCTCAAGGGAATGGGCTTGT GCCAGCTTCCTGATTACTACGTGCTGGAACACCTGCGCAGCGGCGCGCTGATATCCTTGCTTGAACACCATCAACCCCCCAACACGGCTGTGTGGGCGCT GTATCCGCAGCAGCGTCATCTTTCGCCCAAGGTACGCGGGCTGATCGAACACCTGCGCCAAGGTTTGGCCCAATGCGAGGCCTATGCCGTGGCGCCTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGGCTTGGAGCGCTTCAGCGCTTCAGCCAGGCCAAGTCTTCGGGACGGGTGACCTTGATGTTGTCGGCACGCCCTTCGATCAGGCGTGGCGCATGCCCCG CCCATTCCATGGCGCTGGCCTCGTCGGTAATGGTCACGCCGGCCACCATCGCATCGGCCAGCGCCCTTTGAAGGGGGCCAAGCCGGAACATCTGCGGGGT GAACGCATGCCAGACCAGGCTACGGTCGAGCGTCTCGGCCACACGGCCCGTGGCATCCACCCGCTTGAGGGTATCCCTGGCAGGAACGGCGAGCAGGCCT CCCACCTCGTCGTGAGCCAGCTCGCTCAGTAACCGCTCAAGGTCATTGGCCGCGAGATTGGGCCGCGCTGCGTCGTGGACCAAGACCCAGTCACGGCTAC CGGCGCCCAGTTCATTGAGTTTGAGCAGCGCGGCGAGCACCGAATCGCAACGCTCCTTGCCCCCTTCGGCGCGATGGATGGAGGGATGCCCGGCGCAGGC
Amino Acid Sequence
>LysR family transcriptional regulator
MSAGWEGIDEFVAVAEHGQFSAAASTLGVSSSHVSRQVAMLEDRLQARLFYRSTRRVSLTEAGHTFLQHCRRLHDGRDEALRAVHDLASEPKGLLRMTCA VAYGERFIVPLVSDYQQRYPRLQLDIELTNRTLDLVDEGLDLAIRLGRLQDSRLVAHRLAPRRMYLCASPAYLERYGRPHSLSELARHNCLVGSSDQWQM LQEAREINVRVSGNWRCNSGQAVLDAALKGMGLCQLPDYYVLEHLRSGALISLLEHHQPPNTAVWALYPQQRHLSPKVRGLIEHLRQGLAQCEAYAVAP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site