Pseudomonas sp. CB1, TD31_RS08890

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CB1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGGCGCCCTTCTTCCCTGCCATGGGCCCGAGCTGGACGGCGAAGCAGCCATTACCTGGCGGCGAGGACATGACCACGCCCAAGGTGCTGGCCGAGGCGCT TGTCGCCAGGGCTGCCTGGCTTCCAGCCGAGGTGGCCACGCGTTGGTCAGTCACCTATGGCAGCCGCGCATGGCGCCTGCTGGAAGGTTGCCAACAGTTG GCAGACCTTGGCCAGCATTTTGGCGCGGGCCTCTATGCGCGAGAAGTCGACTACCTGCGCGACAACGAATGGGTGGCCTCGGCCGAAGATGTCCTCTGGC GCCGAACCAAGCTGGGCCTGTTCCTGGACAGCGAGGGCCAACGCGCGCTGGAGGCTTACCTGCCAAGTCAGACCGTACAGAAGGGCAAGGTACAGGCGGC CTGAGCGGCACCGCCGGCGGGCGGTCGTAGCGGTTGTGGCGAGCGCGAGCGCTGTGTTGAAATAGTGCCCACTTAGCGCTTCGAACCTTCCCGTCCCGCC
DNA Sequence for Gene
>TD31_RS08890
GTGAACACTCCCTCCCTGCGTCAATGGTTGCTCGCGGCCCTACTACTGTGCGTCACACTCGCCCTGGGGCTGGTCGGCTATACATTGAGCGAGCGCCTGG GCTTGAAAGCGCAAGCCGACGCAGGAGCCCGTCAGCTCGAACTCCATACCCGGGCAGTGGAAAGCGAGCTGGACAAGTACACCTATCTGCCAAGCGTGCT GGAACTGGAACGCAGCGTGCAGACGTTGCTGTCCGGCGTGGGCGATGCGCCCATCGCCGCGGTGAACCAGTACTTGGAAGGCCTGCGCGAGCGCAGCGGC AGCCGCGCCATTTTCCTGATGGATGTAAACGGTCATGTGCTTGCCAGCAGTAACTGGCGAGACCCTGACAGCTTCATTGGCGAAGACCTGGCCTTCAGGC CCTATTTCAAGGATGCCCTGCTAGGGCGGCCGGGACGCTTCTATGGCCTGGGCACTACCACCGGCGAGGCCGGCTACTTCCTGGCCCACGGTTTGCGAGC CGAAGGCAGGATAGTCGGAGTCGCGGTGGTCAAGGTCCGCCTGGACGCTCTGGAAGCTCGTTGGCAGAAGGCACGGCTGGAGGCCTTTGTCTCGGACGAG AACGGCATCATCATTCTTTCCAGCGATGCGACTCGTCGCCTCAAATCCGTCGAACCACTGGATGAAGAGAGCCGTGCGCGCCTTGCTCGCAGCCTTCAGT ACTACGGCTTTCCCCTGGATGAGCTGCAATTTTCGCAGCGTGAATCCGTCGGGCCTGGGGCGGAACGCCTTATCCTTGGCCAGGATGATGGCTACGGCGA TCGGCGCCCCGCTCGCTACCTTGCCCAGAGCCTCGCGGTGACAGATACGCCCTGGCATCTGACACTGCTCACCCCGCTCAAGGACCAACGCAGGGAATCC ATCGTGCATGGGGTGCTGGTTGCCTTCGGATTCGCGTTGCTGGTTTTCTTGCTTATCGCCCGCAATGAGCGGCGCAAAGTGGTCGCTACCCGCCTGGCGG CGCGAGAGGCCCTGGAAACGGCCAATGACCTGCTCGAGAAGCGCATCGCTGACCGTACCAAGGCACTTCGCAACAGCAACGAGCGATTGAAAAGCCAGAT CCGCGAGCGGCGCCAAGCCGAGCAAACGCTGCGCAAGGCCCAGGATGAACTGGTTCGTGCCGAAAAGCTGGCGACCATTGGACAAATGTCCACCAGCATC GCCCACGAGTTGAATCAGCCACTGGCTGCGCTGCGCACCCTTTCGGGCAATACGATACGCTTCCTGGAAAGAGGCCACCTCGAGGTGGCTGACACCAATC TGCGTACCATCAATGATCTGGTGGACCGCATGGGCCGCATCATCGCGACCTTGCGTGCCTTCGCGCGGGGCGGCGACCGCGGCGGCCAGGCGGAGGTCGC CAGCGCGCTCGGTGCGGCTCGCGGCGTGTTGCAACAGCGATTCGAAAACCGGCCGATCAGGCTGGACTGCCAGGTCACGCCAGGCTGCGTGGAGATCGAG CAGACCCGCCTGGAGCAGATCCTGGTGAATCTGCTGAGCAATGCCCTCGATGCCGTCGAGAGTAGCGCGCAGCCTGTGATCGAAGTGAGGGGTCAGGTAA TCGACGACAGTTATCGGCTTCGCGTGTCCGACAACGGCACGGGTATCGACACTCATGGGCGGCAGCGTCTGTTCGAGCCTTTTTTCACCACCAAACTCGG CGGGCATGGACTTGGGCTCGGCCTGACCCTTTCAGCGCAACTGGCAGCCGCGGCCAAGGGTCAGCTGAGCCTTGATGAACAGGCGGGCAGCGGGGCCAGT TTTCTACTTACCTTGCCATTGAGTGCCGTCAGCAACAGGAGCACCTCCCCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGTCATCCTTGCCTGTGCTGGTGATCGAAGACGATCCACACGTTCTGCTAGGTTGCCAGCAAGCCCTGGCGCTGGAAGATATTCACAGCGAAGGCGTAGC CAGCGCGGAAGCGGCACTGGCGCGCGTCGAAGCGGGCTTTCCAGGCGTCGTGATCAGTGATATCCGCCTTCCCGGCATGGACGGGCTTACCCTGTTGAGC CATCTGCGGACCCTTGACCCGGCGCTGCCGGTGATTCTCATCACAGGGCATGGCGACATTGCCCTGGCGGTGAGCGCGATGCGCCAGGGCGCTTATGACT TCATGGAAAAGCCCTTTTCGCCGGAGCAGCTCGTCGACGTCGTGCGTCGGGCCCTGACGCAGCGATCGCTGACCTTGGAAGTGCAGGCGCTGAGACGCCA GCTGGCGGGGCGCGGCCTGCTGGAAGAACGTCTGCTGGGCCAATCCCGGGCCATGCAAACGTTGCGCGAAACGTTGCGCAACGTGGCGGACACGCCGGCC
Amino Acid Sequence
>histidine kinase
MNTPSLRQWLLAALLLCVTLALGLVGYTLSERLGLKAQADAGARQLELHTRAVESELDKYTYLPSVLELERSVQTLLSGVGDAPIAAVNQYLEGLRERSG SRAIFLMDVNGHVLASSNWRDPDSFIGEDLAFRPYFKDALLGRPGRFYGLGTTTGEAGYFLAHGLRAEGRIVGVAVVKVRLDALEARWQKARLEAFVSDE NGIIILSSDATRRLKSVEPLDEESRARLARSLQYYGFPLDELQFSQRESVGPGAERLILGQDDGYGDRRPARYLAQSLAVTDTPWHLTLLTPLKDQRRES IVHGVLVAFGFALLVFLLIARNERRKVVATRLAAREALETANDLLEKRIADRTKALRNSNERLKSQIRERRQAEQTLRKAQDELVRAEKLATIGQMSTSI AHELNQPLAALRTLSGNTIRFLERGHLEVADTNLRTINDLVDRMGRIIATLRAFARGGDRGGQAEVASALGAARGVLQQRFENRPIRLDCQVTPGCVEIE QTRLEQILVNLLSNALDAVESSAQPVIEVRGQVIDDSYRLRVSDNGTGIDTHGRQRLFEPFFTTKLGGHGLGLGLTLSAQLAAAAKGQLSLDEQAGSGAS FLLTLPLSAVSNRSTSP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site