Pseudomonas sp. CB1, TD31_RS07960

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CB1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGGCTCAGTTCACCCTGTGGGAGGCAGCGTCAGCTGCCGAACGGCTCCCCAGCTGCCGCTAGCGCCCACAGGGCTTCGGCTCAGCCTCGGCCCAAGGGCA GATTTCGACGAGCGGCTCGCGGCCAACGGCCTTCCCAGGGCTTATGCCAACAACCCCATCGCAGCGAAGCCCCGCCCGTCACCCCGCGCAAAAACACATC ATACTGTGCTATACCTCAATATCTGGCACTAGATATTGGGTATATAGTTCGCTTCCGCCGGGCTGGACCAGCGCACAAATCTGCTCTCGGGCCGCGCATT CGGGAATGCATTTCCGTATAATCCCGGCTCCCAACAAGCTGACCATGCGCACCGAGACAGCGGTTAACCACACCGGCTGAAGGCGTTCTATAGCCCACCG TGGCAGACATACCCATTCCGCGAGCCAGGCCCAACGCCTGGCTTGCCGCTTTATCAACTTCAACCGCCGCTTCGCGCGGCCTTGAACAGGAGCTTTCCCC
DNA Sequence for Gene
>TD31_RS07960
ATGCTGAGCTGGGACGAATTCGACAAAGACGATGATGCCAACGCGCCACAGGCTGCCGGCACTGCCACCGCTACCGCCAGCGCACTGGACAAACTCGACA GCGCCGGTGACGCCGCCGCCCATGAAGCCCGCGAAGTGAGCGCCAACGACAGCGCGGCGGTGGCCCGGGCCAAGGCCGCGCTCAACAGCCTGGACATCGC CGAGGGCCTGGCCGAGCTGGAAGGTTCCGCCGCCCGGGTGAAGGTCGATGAGAAGCGCATGATCAACTGCCGCGCCGACCTCAACCAGCTGGTGCCTTTC AAATACGACTGGGCCTGGCAGAAATACCTGGACGGCTGCGCCAACCACTGGATGCCGCAAGAGGTCAACATGACCGCGGACATCGCCCTCTGGAAAAGCC CGGAAGGCCTGACCGACGACGAGCGCCGCATCGTGATGCGCAATCTGGGCTTCTTCTCCACCGCCGATTCCCTGGTGGCCAACAACCTGGCCCTGGCCGT GTACCGCCTGATCACCAACCCCGAGTGCCGCCAGTACATCCTGCGCCAGGCCTTCGAGGAAGCGATCCACACCCACGCCTACCAGTACTGCATCGAGTCG CTGGGCATGGACGAAGGCGAGATCTTCAACATGTACCATGAGATCCCTTCGGTGGCGAAGAAAGCCGCCTGGGGCCTGAAGTACACCCGCGCCATCTCCG ACCCGCAGTTCAACACCGGCACCCCGGAAACGGACAAGGAACTGCTGCGCAACCTGATCGCCTATTACTGCGTGCTCGAAGGCATCTTCTTCTACTGCGG CTTCACCCAGATCCTTTCCATGGGCCGCCGCAACAAGATGACCGGCGTGGCCGAGCAGTTCCAGTACATCCTGCGCGACGAATCCATGCACCTGAACTTC GGTATCGACGTGATCAACCAGATCAAGATCGAGAACCCGCACCTGTGGGATGCCGAACTCAAGGAAGAAGCCACCCAGATGATTCTCCAGGGTACCCAGC TGGAAATCGAATATGCGCGCGACACCATGCCGCGCGGCGTGCTGGGCATGAACGCGGCCATGATGGAGGACTACCTCAAGTTCATCGCCAACCGCCGCCT GTCCCAGATCGGCCTGAAGGAAGAATACCCGGGCACCAGCAATCCCTTCCCGTGGATGAGTGAGATCATGGACTTGAAGAAAGAGAAGAACTTCTTCGAG ACCCGCGTGATCGAGTATCAGACCGGCGGGGCCTTGAGTTGGGATTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTGAGTGACCGGCGGGTTGCCGGCGGCCAGCGGGGTTCTTTAGGCTTGCTGGAAACCTGCCTGGAAGGTCATTTCAGCGTATGGCTGCCTGACCGGCCAA ACGCTCGAGACACGACAAGCGTATACCGGCAAGCGCTAGCACCGCCGTGCTCGCGCACTGCCCGCTCCCTAGCCCGCTGCCGCTGCCGCTGCCAGTCCAG CTTCCACAACGCCTGGGCTGTAATCCCGCAAATGCGGCAATGCGGCATCGTCTTCGCTGAACAGGTGAACCGGCTCCTCCAGCGGGCAGGTTGACGTGCA CGCCTTCGCTCTCGACAACCAGCACCAGCGTCTGAAGGAAAGGCATCCGCAGCAAGCCGATGAAGCCTGCCATGAAACGGTTGCGCGATGATCGTACAAA CACTTCGCCCACAGGCCCGCCCGCCGTTGCGCTGATTGTTGCATTGAGCCTAGCTTAAAGACGCGGGGTTGACAGGGCACGGCATCGCGTGAAGCTGCGT
Amino Acid Sequence
>ribonucleotide-diphosphate reductase subunit beta
MLSWDEFDKDDDANAPQAAGTATATASALDKLDSAGDAAAHEAREVSANDSAAVARAKAALNSLDIAEGLAELEGSAARVKVDEKRMINCRADLNQLVPF KYDWAWQKYLDGCANHWMPQEVNMTADIALWKSPEGLTDDERRIVMRNLGFFSTADSLVANNLALAVYRLITNPECRQYILRQAFEEAIHTHAYQYCIES LGMDEGEIFNMYHEIPSVAKKAAWGLKYTRAISDPQFNTGTPETDKELLRNLIAYYCVLEGIFFYCGFTQILSMGRRNKMTGVAEQFQYILRDESMHLNF GIDVINQIKIENPHLWDAELKEEATQMILQGTQLEIEYARDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTSNPFPWMSEIMDLKKEKNFFE TRVIEYQTGGALSWD
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site