Pseudomonas sp. CB1, TD31_RS07920

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CB1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GACGGGCGATTGCTTAGCCTTGTTTGCGTCCCGGCCTAACGTGACGAATGGCGTTTATCGACGCGTTTTCCTACAGCCCTTGGGGCAAAGGGCGCGCAGC GGCTATCCCACATTTTTCCCACAAGTTATCCACATTTCCTGATGTTGCAAAGGCTACCCAAGCGCATTATCTTGTATCCCCTTCGCGCCAGACCACTACA TCTTGGGTTTTGGCGTCCTGCGTCAACACTACGCTATAAAAGAATTCAAGCCCCTGAAGGCTGATTTTTCGGTTGCGGTACAGGCCTGCTGGCATGCCTG CCAGACTGTCTGGGCCTGCAAGCTTCGTTTTGCCAGGGAGGCGTCAAAAGCGCCCCTTATTTGATCAAGAAGTCGCTGTATACCGGCGAAGCTGGCGAGT GCCTCATGGGCCCTGGTCGCTCGTCGGTTGTCGTGCTTCACATGGAACGGCAGCCACCCCTGCCGCGCCCAACTAAACATTAGAGATCGTGGAGACCCCC
DNA Sequence for Gene
>TD31_RS07920
ATGCACACCGACACCACTCGCGAGAACCCGACAGGCCAGGCGCCTCAGGGCGCGGGCTCCAACCAGGAGCTGAGCGCCACCGCACCCGGCCAACTGCGTG TGATCAAGCGTAACGGTACTGTCGTTCCCTATACCGACGACAAGATCACCGTGGCCATCACCAAGGCGTTCCTCGCAGTGGAAGGCGGCAGCGCCGCCGC GTCCTCGCGCATCCACGATACGGTCGCGCGCCTGACCGAGCAGGTGTCGGCCACTTTCCGTCGGCGCATGCCGTCGGGTGGCACCATCCACATCGAAGAG ATCCAGGATCAGGTCGAACTGGCCCTGATGCGCGCCGGCGAGCACAAGGTTGCCCGCGACTACGTGATCTACCGTGACCAGCGGGCCAAGGAGCGCGCCA GCCGTAACGACGCCAGCCAGCCCGCGCAGCCCCATCCGAGCATCCGCGTGGCCCGCGCCGACGGTACCCTCGAACCGCTGGACATGGGCCGCCTGAACAC CATCATTTCCGAAGCCTGCGAAGGGCTGGCCGAAGTGGACGGTGGGCTGATCCAGCGCGAAACCCTGAAGAACCTGTACGACGGCGTGGCCCTGAAGGAT GTGAACACCGCCCTGGTGATGACCGCCCGTACCCTGGTGGAGCGTGAGCCGAACTACTCCTTCGTCACCGCCCGCCTGCTGATGGATACCCTGCGCGCCG AAGGCCTGGGGTTCCTGGGCGTCGCCGAAAGCGCCACCCACCACGAGATGGCCGAGCTGTACGCCAAGGCCCTGCCGGCCTACGTGGCCAAGGGCGTGGA ATTCGAACTGCTCAACCCGGAACTGGCCCGCTTCGACCTGGCCAAGCTGGGCGCGGCCATCGATCACGAGCGCGACCAGCAGTTCACCTACCTGGGCCTG CAAACCCTGTACGACCGTTACTTCATCCACAAGGATGGCGTGCGCTTCGAACTGCCGCAGGTATTCTTCATGCGCGTGGCCATGGGCCTGGCCATCGAAG AGAAGAACCGTGACGAGCGCGCCATCGAGTTCTACCGCCTGCTGTCGTCGTTCGACTACATGGCCTCCACCCCGACCCTGTTCAACGCCGGCACCCTGCG CCCGCAGTTGAGCTCGTGCTACCTGACCACCGTGCCGGACGACCTCTCCGGGATCTACGGCGCCATCCACGATAACGCCATGCTGTCCAAGTTCGCGGGC GGCCTGGGCAACGACTGGACGCCGGTCCGGGCGCTGGGCTCGTACATCAAGGGCACCAACGGCAAGTCCCAGGGGGTCGTTCCCTTCCTGAAGGTGGTCA ACGATACCGCCGTGGCGGTCAACCAGGGCGGCAAGCGCAAGGGCGCGGTCTGCGCCTACCTGGAAACCTGGCACCTGGACATCGAGGAATTCCTCGAGCT GCGCAAGAACACCGGTGACGACCGTCGCCGCACCCACGACATGAACACCGCCAACTGGATTCCGGACCTGTTCATGAAGCGGGTATTCGAAGACGGCAAG TGGACCCTGTTCTCCCCGTCCGAAACCCCGGACCTGCACGACCTCACCGGCAAGGCGTTCGAGGAACGCTACGAGTACTACGAAGCCCTGATCGAATACG GCAAGATCAAGGTCTACAAAACCCTGCAGGCCAAGGACCTGTGGCGCAAGATGCTCTCGATGCTGTTCGAGACTGGTCACCCGTGGCTGACCTTCAAGGA CCCGTGCAACCTGCGCAGCCCGCAGCAGCACGTGGGCGTTGTCCATAGCTCGAACCTGTGCACCGAGATCACCCTGAACACCAACAAGGATGAGATCGCC GTCTGCAACCTGGGCTCGATCAACCTGCCGAACCACATCGTGGACGGCAAGCTGGACACCGAGAAGCTGTCGCGCACCATCAAGACGGCCGTGCGCATGC TCGACAACGTGATCGACATCAACTACTACTCGGTGCCCCAGGCGCGCAACTCCAACCTCAAGCACCGCCCGGTGGGCCTGGGCATCATGGGCTTCCAGGA TGCGCTCTACCTGCAGCACATCCCTTATGGCTCGGACGAGGCGGTCAAGTTCGCCGACCTGTCCATGGAAGCTGTGAGCTACTATGCCATCCAGGCGTCG TGCGACCTGGCGGACGAGCGTGGCGCCTACGAGACCTTCCAGGGCTCGCTCTGGTCCAAGGGCGTGCTACCGCTGGACTCGCTGGAAACCCTGATCGAGC AGCGTGGCGCCAAGTACATCGAAGTCGACCGTAACGAGACCCTCGACTGGGCACCCGTGCGCGCGCGGGTTCAGAAAGGCATTCGCAACTCGAACATCAT GGCCATCGCACCGACCGCGACCATCGCCAACATCACCGGCGTGTCGCAGTCCATCGAGCCGACCTACCAGAACCTGTACGTGAAATCGAACCTGTCGGGC GAGTTCACCGTGATCAACCCCTACCTGGTACGCGACCTCAAGGCGCGCGACCTGTGGGACCCGGTCATGATCAACGACCTCAAGTACTATGACGGTTCGG TGCAGCAGATCGAGCGCATTCCTCAGGAGCTCAAGGACCTCTACGCCACGGCCTTCGAAGTGGACACCAAGTGGATCGTGGAGGCGGCCAGCCGTCGCCA GAAGTGGATCGACCAGGCCCAGTCCCTGAACCTGTACATTGCCGGCGCCTCGGGCAAGAAGCTGGACGTGACCTACCGCATGGCGTGGTTCCGTGGCCTG AAGACCACCTACTATCTCCGTGCCTTGGCCGCCACCAGCACCGAGAAGTCCACCATCAACACCGGCAAGCTCAACGCGGTGTCCAGCGGTGGCGACGGCG CCCTGCACGCCGCGCCCCAGGCTGCCGAGTCGGCACCGGCCGGCCCGGCACCGGTGCCCAAGGCTTGCGCGATTGACGAGCCGGATTGCGAAGCCTGCCA GTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGCCCCGCCCCTGCCTGTAGCCGCCAGGCCGCAGGCCGCAAAAAGCCCCCGCCCTTGAAAGGCGGGGGCTTTTTCGTCTGCGCACCGCCAGACTGCACCA GTACCGAACAGCCTTGCACTGAGCGAGTGCTCCGAAGTGGACCAAAAGGTCTGGATTCACTTCTCGCTTTATCTTAAAGCGTTCTTGGTGCTCAGGATTT TCCCGCTGGCATGCATTCTGCTCCGCTGACCCGCTACCGCCTCATGATCAAGCGAATGCAGGGGCGAGCCACTGGGACACTCCCACCAACGAAGGGCGGA CTCTATGAACAACCCGTTTTCCTGGTCTGTAAAAGCCGATCTGGGCGATATCGTTGCCCCCCATGAACGCCTGCCCTGGCCGCAGACCCTTGCCCTGGGC ATACAGCATGTATTCGCCATGTTTGGCGCGACCTTGCTGGCGCCCTTGCTCATGGGTTTCGATCCGAATGTGGCGATCATGATGAGCGGCCTGGGGACGT
Amino Acid Sequence
>ribonucleotide-diphosphate reductase subunit alpha
MHTDTTRENPTGQAPQGAGSNQELSATAPGQLRVIKRNGTVVPYTDDKITVAITKAFLAVEGGSAAASSRIHDTVARLTEQVSATFRRRMPSGGTIHIEE IQDQVELALMRAGEHKVARDYVIYRDQRAKERASRNDASQPAQPHPSIRVARADGTLEPLDMGRLNTIISEACEGLAEVDGGLIQRETLKNLYDGVALKD VNTALVMTARTLVEREPNYSFVTARLLMDTLRAEGLGFLGVAESATHHEMAELYAKALPAYVAKGVEFELLNPELARFDLAKLGAAIDHERDQQFTYLGL QTLYDRYFIHKDGVRFELPQVFFMRVAMGLAIEEKNRDERAIEFYRLLSSFDYMASTPTLFNAGTLRPQLSSCYLTTVPDDLSGIYGAIHDNAMLSKFAG GLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVFEDGK WTLFSPSETPDLHDLTGKAFEERYEYYEALIEYGKIKVYKTLQAKDLWRKMLSMLFETGHPWLTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIA VCNLGSINLPNHIVDGKLDTEKLSRTIKTAVRMLDNVIDINYYSVPQARNSNLKHRPVGLGIMGFQDALYLQHIPYGSDEAVKFADLSMEAVSYYAIQAS CDLADERGAYETFQGSLWSKGVLPLDSLETLIEQRGAKYIEVDRNETLDWAPVRARVQKGIRNSNIMAIAPTATIANITGVSQSIEPTYQNLYVKSNLSG EFTVINPYLVRDLKARDLWDPVMINDLKYYDGSVQQIERIPQELKDLYATAFEVDTKWIVEAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWFRGL KTTYYLRALAATSTEKSTINTGKLNAVSSGGDGALHAAPQAAESAPAGPAPVPKACAIDEPDCEACQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site