Pseudomonas sp. CB1, TD31_RS06940

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CB1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCCGACTCCCATGTGGCCATTCCACTGGATGAGCGGGACCTGGCCACGTTGCGCGCGACGGACATGCAGCCCTTTATCCGCTTGGGTTCGCGGCTGGACG CGGTCATGCCGGCCCACGTGATCTATCCGGCCGTTGACACCCAGCCGGCAGGGTTTTCCCGGCGCTGGCTGCAAGACATCCTCCGTGGCGAGCTGGGCTT CGACGGGGTCATCTTCAGCGATGACCTGTCCATGGCTGGTGCTCACGTGGCCGGTGATGCGGCCGCCCGCATCGAGGCGGCCCTGAGCGCCGGCTGCGAT ATGGGCCTGGTATGCAACGACCGCGCTGCCGCCGAACTGGCCCTGAGCGCCGCCCAGCGCCTGGGTGTCATAGCGCCCGAGCGGCTGAAGCGCATGGCCC GCCGTAATTGCCCCACCCCCGAATACCGACAGCAACCTGTCTGGCTGGAGGCCCTTGGCGCCCTCCGCCAGGCCGGGTTGCTCGAAGCTGGAGCCTGATC
DNA Sequence for Gene
>TD31_RS06940
ATGACCATTCTTGCAATCATTGGCGGGACCGGCCTGACCCAACTCGAAGGCCTGGACATTCGCCGCTCCGTTGATGTCGAGACCCCTTATGGCACGCCTT CGGCACCAGTGCTGGTAGGCGACTATGCCGGGCGTGAAGTGTTGTTCCTGGCTCGTCACGGCCATCCACACCGCTACCCGCCACACAAGGTCAACTACCG GGCCAACCTGTGGGCCCTCAAGCAGGCGGGCGCCGAGGCAATCATTGCGGTGAACGCCGTTGGCGGCATCCATCCCGCCATGGGCACCGGGCACCTGTGC GTTCCGCATCAGTTGGTGGACTACACCAGTGGGCGTGACCACACCTTCTTCGCCGACGATCTGGAGCAAGTTACCCATATCGACTTCAGCTACCCCTACA GCGAGTCATTGCGGCAGCAGTTGATCTCGGCCCTCGCGGCCCAAGGAGAGGCCTACAGCGACTTCGGTGTCTACGGCTGCACCCAGGGTCCGCGTCTGGA AACCGTGGCGGAAATCGCGCGGCTGGAGCGTGACGGTTGCGACATCGTGGGCATGACCGGCATGCCGGAAGCCGCTCTGGCACGCGAGATCGACCTGGCC TACGCCTGCCTGGCCCTGGTAGTGAACCCAGCGGCTGGGAAGAGCGCTGACGTGATCACCATGGCGGAGATCGAAGCGGCGTTGCATGAAGGGATTGGCA GGGTGCGTGCCGTGCTGGCGAAGGTATTGGTGGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTCGTAAGCAAAAAAGCCAGGCGTTGCAGTGTCGGATGCTGTGGGGCTCGTTGATCCACGAGCCCTTTTTAGCGCCTACTATTAATATCGAAAACCAGAC AAGATTTGTGGATGCGCCGGGGGTAGAGGCTACAAGCGCCCACTTGAACTGCCTTGCGCCGGTGGGTCAGCGCTCAATTAGCGTATGATAAACAACGACC ACCGCTAGCAGTAATAGTATTTCTATGACGAAAAGACTAAGCAGGAGTCGCCTCGCCCGAGTGGGAAAGCGTTTGACCTCATCCAGGTCGATAATTCCTC GGCGTGTGAGTAGCTGTGGTACGGCTAACACCATAGTAATCATCCCTGTTCGCAACAGCTTGCCGGGAAGTCCTGCATGTGCGAGATTTTTTTTATTGTC CGTCACGAAGGTGCAATTTGGAAGAAATGATTCGAAATAATCGGTGTGCTTATGAGCAATATAGGTCTGTACAATCATCGCGATCCAGATAGATGCAATT
Amino Acid Sequence
>5'-methylthioadenosine phosphorylase
MTILAIIGGTGLTQLEGLDIRRSVDVETPYGTPSAPVLVGDYAGREVLFLARHGHPHRYPPHKVNYRANLWALKQAGAEAIIAVNAVGGIHPAMGTGHLC VPHQLVDYTSGRDHTFFADDLEQVTHIDFSYPYSESLRQQLISALAAQGEAYSDFGVYGCTQGPRLETVAEIARLERDGCDIVGMTGMPEAALAREIDLA YACLALVVNPAAGKSADVITMAEIEAALHEGIGRVRAVLAKVLVG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site