Pseudomonas sp. CB1, TD31_RS06590

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CB1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGCAGATTGCCGACGGGTCCGGGCTGGCAACCTTCCTGCGGACCCTGGGAGGCAGTTTCGCCGCCTCCCTGACCACCTGGATCTGGAGCCGCCGGGCCAT CGAGCATCATGCCTACCTGAGCGAGAACATCAGCACACTGGACCTTGCCACCCAACAGATGCTCCAGCAACTGGGCGGCGCCAACGACAAGAGCTACGCC CAGCTCGAACAGATGGTCAATGCCCAGGCTTATATGTTCTCCACGGTGGATTACTTCACCCTGCTGGGCTGGATCTTCGCCGCGCTCATTCTGCTGGTGT GCCTGGCCAAACCACCATTCACGGCCAAGGCAGGGCCGGCTTCGGGTGGTCACTGACGCCTGGCCAGGGCCGCCGGGCATCATGGGGCATGTCAGCCGGG TGCGCTCCAGGCGTGCCCAGGCCTGCGCTCATGGCCGCCTAATGCAGGCTTAATCAGGTCGGCGTACGCTAGACACCTGTCAGCAACCATCGAAACGCCT
DNA Sequence for Gene
>TD31_RS06590
ATGCACCTCTTACTCTGTGAAGACCACGACCTCATCGCCAGCGGCATCGTTGCCGGGCTCGGTGCCCAGGGCGCGGTGGTAGACCGGGTGGACACCGCTC GCGCCGCCGAGGCATTGCTCAAGGTCGCTCGGTTCGATGCCATGATCCTGGACCTTGGCTTGCCGGACGAAGACGGGCTAAAGCTGCTCAAGCGGCTGCG CCAGCAGGGCCAGGCGCTGCCTGTGCTGGTCTTGACCGCCCGTGATGCCATCACCGACCGGGTAGCGGGCCTCGAAGCCGGGGCCGATGATTATCTACTC AAGCCCTTCGACCTGCGCGAGCTCAATGCCAGGCTGCACACTCTGCTGCGCCGAATGGCCGGACGGGCTCAGAACCGCATCGAGCACGGTGCCCTTTGTC ATGACCCCAGCAGCCGGGAAACCTGGCTGGGCGGCGAGCCTGTGGACCTTTCCCGGCGCGAGCAAGCGTTGTTGCATGCTTTGCTGCAGAACAAGGGTCG GGTGTTGAGCGCCGAGCAACTCAAGGACTGCGTCTATGGTTTTGGCGACGAAGTGGAAAGCAATGCCTTGAACGTGCATATCCATCATCTACGCCGCAAG CTCGGCAACAATATCGTCGAAACCGTTCGAGGGCTGGGCTATCGCCTAGGGCCGGCCGGCAGTGACCAACGGGAGCGTGCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCTGCGCTTGCGCCTGATCCTGATCCTCGGTGGTGCCTTCGTGCTCATCTGGGCCTTGGCCGCCGCCTGGATGTTCCGCGACCTGCGCGGGCAGATGAT GTTTTCCCTGGATCAACGCCTGGTAGCCTCGGCGCGCATGGTGGCCGGGCTGGTGCAGCAGTTGCCGCACCCCCTTGGCGCTCAGGCGGAGGGTGCGCGT ATTGCCGCGGACCAGGCCAGCTTGCCGGATGGCATGGCCTGCAAGGTAAGCTCGCTGCGTGGCGAGATTCTGGCTACCAGCCAGCAGGGCGTTGAATCGG TCCTTGGTCAAGAAGGTAATGGCTTCCATGACCAGCTCATCGATGATGAGCACTGGCGCAGCTTCACCCTGGTTCACGCGGATGTGCGCATCACCACGGC CGACCGTCAGCAGGAGCGCGAAGCCCTTAACCAGTCGGTGTTGTTGGCGGCGTCCGCGCCTGTGCTGATGGCGCTATTGGGCAGCCTCGGTGTGCTCTGG
Amino Acid Sequence
>transcriptional regulator
MHLLLCEDHDLIASGIVAGLGAQGAVVDRVDTARAAEALLKVARFDAMILDLGLPDEDGLKLLKRLRQQGQALPVLVLTARDAITDRVAGLEAGADDYLL KPFDLRELNARLHTLLRRMAGRAQNRIEHGALCHDPSSRETWLGGEPVDLSRREQALLHALLQNKGRVLSAEQLKDCVYGFGDEVESNALNVHIHHLRRK LGNNIVETVRGLGYRLGPAGSDQRERA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site