Pseudomonas sp. CB1, TD31_RS05740

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CB1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTTCCAGGCCGGATTGTCATGGATCACCATTCTCAAGAAGCGCGCACGCTACCGTGAAGTGCTGTTCGGCTTCGATGCCCGGCGGCTGGCAGCCATGACC GACGCTGAAATCGACATACGCATGCAGGACCCGGGTATCATCCGCAACCGGATGAAACTCAACGCAGCCAGGCAGAATGCCCAGGCCTGGTTACGCCTGG AAGACCCGGTAACCTTCCTCTGGTCTTTCGTAGGTGGAGCGCCACTGATCAATCACTTCGCCAGCCGCGCCGAGGTTCCGACCCAGACGCCCCAGGCCCA GGCCATGAGCAAGGCCTTGAAGAAGGCCGGCTTCAGTTTCGTGGGCCCGACCATCTGCTATGCCTACATGCAATCGAGCGGCATGGTGATGGACCACACG ACCGATTGCGGGTGTTATCCACAGCTGAGCCAGGCGCGCTCAGGCGAGACGGCGCCGGGCTGAGGTAGAATGCTCGGCTCCATAGCAAGGGAAACGAATT
DNA Sequence for Gene
>TD31_RS05740
GTGGAAAAGTTAAAGGGCGCCTTGATGGTGGGCTTGCTCAAGGCGTTCGCCTTGTTGCCCTGGCGCGGTGTGCAAGGGGTAGGCGCGGCAATCGGCTGGC TGATGTGGAAGCTTCCCAACCGCTCGCGAGACGTAGTTCGTATCAACCTGGCCAAGTGTTTTCCGGAATTGTCAGCCGCCGAGCGTGAACGGCTGACCGG TGCGAGCCTGAAGAACATTGGCCGTTCGTTCACCGAGAGCGCCTGCGCCTGGATCTGGCCGCCCGAGCGGTCTCTGGCGCTGATCCATGAAGTCGAGGGG CTGGAAGTGCTGGAGCAGGCCTTGGCCACCGGCAAGGGGGTAGTAGGGATCACCAGCCACTTGGGTAACTGGGAAGTGCTCAACCATTTCTACTGCAGCC AGTGCAAGCCGATCATCTTTTACCGCCCGCCCAAGCAGAAAGCGGTGGATGAGCTTTTGCGCAAGCAGCGGGTACAGCTTGGAAACCGCGTGGCGCCTTC GACCAAGGAAGGCATCCTCAGTGTGATCAAGGAAGTGCGCAAGGGCGGTCAGGTGGGCATCCCGGCGGACCCGGAGCCCGCGGAGTCAGCCGGCGTGTTC GTGCCCTTCCTGGGCACCCAGGCCCTGACCAGCAAGTTCGTGCCCAACATGCTCGCCGGCGGCAAGGCGGTAGGGGTGTTCCTGCATGCCGTGCGCCTTC CGGATGGCTCGGGTTTCCGGGTCATGCTCAAGGCTGCGCCCGAGGACATGTACAGCACGGATGTGGAAGTCGCCGCCGCAGCCATGAGCCGCGTGGTGGA GGACTACGTCCGGGCTTATCCGGACCAGTACATGTGGAGCATGAAACGCTTCAAGAAGCGACCTCCAGGCGAGGCGCGCTGGTATTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCAGGCTCAGGCGCCGCGGTCGAGCTTACGTAGGAATACGGTCATTTCCTTTTCCGCCTGCTTGTCGCCCTTGGCGCGAGCGGCCGTCAGGCCTTGCTC CCAGGCCTGACGTGCCGCGGCGATATCCTGCTGCGCCTGGTATGCCTTGCCGAGCAGTTTCCAGGCCGCCGAATAGCCAGGGTCCTACGCTACGCACTGG CGCAAGTGCTCGGTGGCCTGTGCACAATCACCGCCATCGAGATAACCCTTACCAAGGCCGAAGCGCAGCAATGGGTTATCCACACCCTTGGCGAGCATCT TTTCCAGTGACTCGATCATGGCTTCTCCTAGAAGAACGTCAAGCCTACGTGAAATAGTTTTTCCACGTCCCGGATGTACTTTTTATCCACAACGAAAAGG ATCACATGGTCTCCGCTCTCAATCATCGTGTCTGCGCGAGCGATGATGACTTCCTGGTCGCGGATGATGGCCCCGATGGACGTGCCGGGCGGCATGTTGA
Amino Acid Sequence
>lipid A biosynthesis lauroyl acyltransferase
MEKLKGALMVGLLKAFALLPWRGVQGVGAAIGWLMWKLPNRSRDVVRINLAKCFPELSAAERERLTGASLKNIGRSFTESACAWIWPPERSLALIHEVEG LEVLEQALATGKGVVGITSHLGNWEVLNHFYCSQCKPIIFYRPPKQKAVDELLRKQRVQLGNRVAPSTKEGILSVIKEVRKGGQVGIPADPEPAESAGVF VPFLGTQALTSKFVPNMLAGGKAVGVFLHAVRLPDGSGFRVMLKAAPEDMYSTDVEVAAAAMSRVVEDYVRAYPDQYMWSMKRFKKRPPGEARWY
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site