Pseudomonas sp. CB1, TD31_RS04740

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CB1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGCGCCAGCGTCATGCCCGGCGTTATGTGGAGCCAGGCCTGGCGCTGATCGGCGATGCTGCGCACACCATCCATCCTCTAGCGGGGCAAGGGGTGAATCT GGGGCTGCTCGACGCTGCGGTCCTTGCCGAAGAGCTGCTGCAAGCCCACAGGCGCGGCGAGCGTCTGGCGGATGTGCGGGTGCTCAGCCGCTATGAGCGA CGGCGGATGCCGCACAACCTGGCCTTGATGGCAGCCATGGAAGGGTTCGAGCGGCTATTCCAGGCCGATCCGTTGCCGTTACGCTGGTTGCGCAACACAG GACTGTCCTGGGTCAATGGCCTGTCGGACGCGAAAGCCCTGTTCGTACGCCAGGCACTAGGCCTGGCGGGTGACCTTCCGGCACTGGCACAGAGCAATGT TCCAGCGGAGTAATATCTGGTAACTAGAGCGAATCGACGAGGCTTTGTAGCCGAAAACGCGAATCGCTAACATCCGGGCTTTTCCTAGGGAAGCCCTGTC
DNA Sequence for Gene
>TD31_RS04740
ATGCTGCTTCTTGTTCGCACCATCGCCGGGTTGCTGTTGGCGATGATTGGCGCCACGGCCCAGGCCAATGAAGGCGTGGTCGTCTATTCCTCGCGGATCG ACGAGCTGATCAAGCCCGTGTTCGATGCCTACACTGCCGAAACCGGTGTCCCGATTCGCTTCATCACCGACAAGGAAGCCCCGCTGATGCAGCGGATCAA GGCCGAGGGCGCCAACACACCTGCCGATCTTCTGCTCACGGTCGATGCTGGCAACCTCTGGCAGGCGGAACAGATGGGTATCCTGCAGCCATTCACCTCT GCGGTGATAGAGGCCAACATTCCATCCCAGTACCGAGCCGCCAGCCACGCCTGGACTGGCCTGAGCCTGCGCGCGCGCACCCTGGCCTATGCCACTGACC GGGTCCGGCCTGAAGAGCTGAGCACCTATGAGGCGGTGGCCGAGCCCCAGTGGGAAGGGCGTCTTTGCCTGCGCACGGCCAAGAAGGTATACAACCAGTC CTTGGTGGCGTCATTGATCGAGGCGCAAGGGCCAGAGCGAACCGAAGCCATTGTCCAGGGATGGGTGAACAATCTTTCCACGGACGTCTTCTCCGACGAC CTCTCGGTACTGCAGGCGATCGCCGCCGGCCAGTGCGACCTTGGCCTGGTCAACAGTTACTACTATGGGCGCCTGCATCGAGAGCAGCCCGAATTGCCGA TTCGCCTGTTCTGGCCCAACCAGCAGGACCGCGGCGTGCACGTGAACCTGTCCGGCATCGGGCTAACCCGTCATGCACCCCACCCCCAGGCCGCCAAAGC CTTGATGGAATGGCTGACAGGGCCCAAGGCCCAGGCCATCTTCGCCGAGGTGAATCAGGAGTTTCCAGCAAACCCGGCAGTGCCACCTTCCACCGAAGTG GCGAGCTGGGGCGCCTTCAAGGCTGATGCTGTTCCCGTAGAAGTAGCCGGCAGACGTCAGGCCGAGGCCATCCGTCTCATGGACAGAGCAGGTTGGCGCT GA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCGGCCCTTGGTGCCAGGGCGCTGGTACTGGTACCTGGTCACGGCGGCGCTTGCCGCCCTGGTGCTGGTGCCGATCGGCGTATTGGTGGCCTCCTGGAA AAGCGTCGACACCGAGATCTGGGCGCATCTCTGGGATACGCAACTGGCGCGGGTGCTGTTCAATACTGCCGTGCTAGCTGCCGGAGTAGGTTGTGGGGTT ACGCTGTTGGGGGTTGGCCTGGGCTGGCTGACCAGTGCATGTGACTTTCCAGGCCGCCGTTGGCTGGATTGGGCCTTGATGTTGCCCTTCGCCGTGCCCG CCTATGTGCTGGCCTTCGTCTTTGTCGGCATGTGCGACTTCGCCGGCCCGGTGCAGAGCACCTTGCGAGAATGGTTTGGCCCAGGCTTACGGTTCCCTCC GGTGCGCTCTACAGGCGGCGTCATACTGGTGCTGGTATTGGTGTTCTACCCTTATGTCTACCTGCTGGCCCGTTCGGCCTTTCTGACGCAGGGGCGTGGC
Amino Acid Sequence
>iron ABC transporter substrate-binding protein
MLLLVRTIAGLLLAMIGATAQANEGVVVYSSRIDELIKPVFDAYTAETGVPIRFITDKEAPLMQRIKAEGANTPADLLLTVDAGNLWQAEQMGILQPFTS AVIEANIPSQYRAASHAWTGLSLRARTLAYATDRVRPEELSTYEAVAEPQWEGRLCLRTAKKVYNQSLVASLIEAQGPERTEAIVQGWVNNLSTDVFSDD LSVLQAIAAGQCDLGLVNSYYYGRLHREQPELPIRLFWPNQQDRGVHVNLSGIGLTRHAPHPQAAKALMEWLTGPKAQAIFAEVNQEFPANPAVPPSTEV ASWGAFKADAVPVEVAGRRQAEAIRLMDRAGWR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site