Pseudomonas sp. CB1, TD31_RS02170

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01584
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004673 protein histidine kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01584
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF47226
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1123 1304 1.7E-37
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 1469 1586 4.7E-36
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 14 95 8.9E-6
SMART SM01231 H_kinase_dim_2 IPR004105 Histidine kinase CheA-like, homodimeric domain 986 1121 3.0E-4
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 14 125 4.71E-10
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 840 937 8.46869E-13
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 841 940 1.4E-14
FunFam G3DSA:3.30.565.10:FF:000016 Chemotaxis protein CheA, putative - - 1122 1306 9.3E-60
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 840 955 3.79E-26
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 426 545 1.44E-17
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1211 1225 2.3E-11
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1291 1304 2.3E-11
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 835 961 7.3E-30
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 1166 1307 3.7E-24
Pfam PF01584 CheW-like domain IPR002545 CheW-like domain 1312 1444 2.5E-20
SMART SM00260 chew_2 IPR002545 CheW-like domain 1299 1443 3.9E-22
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 1468 1581 5.7E-35
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 1471 1581 1.1E-26
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 710 831 7.1E-12
Gene3D G3DSA:3.40.50.2300 - - - 1470 1589 1.7E-39
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 718 809 5.2E-8
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1267 1285 2.3E-11
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 426 552 6.1E-16
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 714 827 6.92E-14
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 281 386 7.54E-5
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 561 680 1.12E-7
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1120 1305 1.1E-51
PANTHER PTHR43395 SENSOR HISTIDINE KINASE CHEA - - 719 1579 0.0
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 426 518 6.97049E-7
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 558 682 1.2E-5
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 426 520 0.3
Gene3D G3DSA:2.30.30.40 SH3 Domains - - 1382 1441 7.4E-18
SUPERFAMILY SSF50341 CheW-like IPR036061 CheW-like domain superfamily 1307 1439 2.09E-22
Coils Coil Coil - - 1072 1106 -
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 1170 1305 7.5E-14
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 839 936 8.8E-8
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 428 518 2.1E-12

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.