Pseudomonas sp. C5pp, RR51_RS22430

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. C5pp Contig32, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGTCAGGTGTGGATATGGATCAAGGACAAGCAACTGACCAGTGACAAGCTCAAGGCCCTGCGCGCCGATTCGCCACTGGGCGAAATCCTCGCCGCCGGCC TGGCCAACTCGCGCCATGGTCGCGAAATCATGAAGGAATGCATCGAGGAGGCCGCCTCGCGCGTCATCCACGAACTGGAACGCTACATCAGCACCCTCGG CACCATCGCCGCCATGGCCCCGCTGTTGGGCCTGCTGGGCACCGTGCTGGGCATGATCGACATCTTCAGCGCCTTCATGGGCTCGCAGATGACCGCCAAC GCCGCAGTGCTGGCCGGCGGTATCTCCAAGGCCCTGGTCACCACCGCGGCCGGCCTGATGGTCGGTATCCCGGCGGTATTCTTCCACCGCTTTCTGCTGC GCCGTATCGATGAGTTGGTGGTGGGCATGGAGCAGGAAGCTATCAAGCTGGTGGAAGTGATCCAGGGCGACCGTGAAGTGGAAGTGGCCGGAGGCAAGGC
DNA Sequence for Gene
>RR51_RS22430
GTGAAGTTCCGGCGCAATCGCCAGCGGGAAAACGTCGACATCAACCTGGCGTCGCTGATCGACGTGGTGTTCGTCCTGCTGCTGTTCTTCGTGGTCACCA CCACCTTCACCCGCGAGACCCAGCTGCGCGTCGAGCTGCCTGAAGCCGCCAGCGCCGAGCCGGCGGCGCCCGACCAGGGCAAACTGGTGGAAATCACCAT CAGCGCCGAAGGCGTGTACTCGGTGAACAACCACTTGCTGCCAAAGAGCGACCTGGCCACCCTGAGCGAAGCGATCGAGCGTGAGTCGGGCGGCGACAAC AAGCTGCCGCTGGCCATCAGCGCCGACGGCAAGACCCCGCACCAGGCCGTGGTCACTGCGATGGATGCCGCCGGCAAGCTCGGTTTCAGCCAGTTGCGCA TGACCACCGTCGAGGCGGCCCAGGGCACACCTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGGCCTTCGCCGACCGCCTGCTCGCCGCCTGGTACGCCGGGCACCCGGCCCTGGCGCTGCTGCGCCCGCTGGAGGCGCTGTATCGCCGCGTGGTCACGCG CAAGCGGGCGCGTTTTCTCAGTGGCGAAAGTGCCAGCTACCGGGCCCCGGTGCCGGTCATCGTGGTGGGTAACATTACCGTGGGTGGTACCGGCAAGACG CCGATGATCCTCTGGCTGATCGAGCACTGCCGCAAGCAGGGGTTGAAGGTGGGCGTGGTCAGCCGTGGCTATGGCGCCAAACCGCCGCAGCTACCCTGGC GGGTGCAGCCCGACCAGGCGGCCGGGCAGGCCGGCGACGAACCGCTGCTGATCGTGCAGCGCACCAGCGTGCCGCTGATGATCGACCCCGACCGATCCCG CGCCGTGCAGGCCCTGCTGGCCAGCGAACCCCTCGACCTGATCCTGTGTGACGACGGCATGCAGCACTACCGCCTGGCCCGTGACCTGGAGCTTGTGCTG
Amino Acid Sequence
>biopolymer transporter ExbD
MKFRRNRQRENVDINLASLIDVVFVLLLFFVVTTTFTRETQLRVELPEAASAEPAAPDQGKLVEITISAEGVYSVNNHLLPKSDLATLSEAIERESGGDN KLPLAISADGKTPHQAVVTAMDAAGKLGFSQLRMTTVEAAQGTP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site