Pseudomonas sp. C5pp, RR51_RS22260

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. C5pp Contig31, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTCCCATCGCCGGCCACTCATCGCTCCACAGCGCATCGAAGGCCATGCCCAATGCATCCGGGGCAACCCGCCGCAATGCCCGATAGCCTTCATTGTGGAC CACGCTGAGGTCTGGTCCCCAGACCACGGCACACGGGAACGGTGACAATTGCATCATGTCGACGGCAATGCGCAACGAAGCCGGCCAGCGCGGCAGCGGC CCGAGCGGTGTACGCCCCCAGTCGAACCGTGCAATCCGTTCGCCCATGAGGTCGACCGGTGCCAGCACAGACGGCTGCAGGATGACCATCGACGCAGGCT CGCGCGGCGTACCATTTGTGACCACTGTCGTGACTCCAGCATGATTCAGAAAAAGTACGGGCGCTGCGTGAATGTGGTTCACGTTAGCACAACACACGCC ACGCAATATGGCGTACTGGCACCTGAGAGCTATGCTCATTAGGTTTTCCCTCGGGCCGGGGGAGCAACGGCCCATTCAGGTTGCCGACGGGAGCGTGGTC
DNA Sequence for Gene
>RR51_RS22260
ATGAGCAAGAAAATGCTGGTGGTGCTGACCAATACAGCCAAGTATCCGACCCTCAAGCGGGCGACCGGCTTGTGGCTGGGGGAAGCGGTGCACTTTGTCG AAAAAGTCGAAAAAGCCGGTTACGAGGTCGATTATGTCAGCCCGCTGGGCGGCTACGTCCCTGTCGACCCGCATAGCTTGCAGATGGCGCCCGACCTGGA CTGGCTGTGGTATGACGACAAGCGCTTCATGACCCGCCTGGGCAACACCTTGAGCCCTGGCCAGGTGAAGGCAGAAGAGTACAGCGTCATCTACTACACC GGCGGGCACGGAGTGATGTATGACTTTCCCGACAACCAGCCGCTGCAAGAGCTGGCCCGCCGGGTGTACGAGCACAAGGGCATTGTCGCGGCGGTTTGCC ATGGCGTTGTCGGCCTGCTGAACATCAAGCTCAGCGACAACAGCCTGTTGCTCAAGGACCGTCAGGTGACTGGCTTCTCCAATACCGAGGAGAAGCTCGT CGAACTGGACAGGGTGGTCCCCTTCCTGACGGAAACCGAGCTGGGTGCCCGCGGTGGTGCCTACAGCAAGCATGAAGACCCGTGGCAGCCGTTCGTGGTG GCCGATGATCGGCTGATCACCGGGCAGAACCCGGCCTCCACGGCCCAGTTGGCCGAAAAAGTGCTCGCCAGGCTGAAGCGAGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CAACGAGGTTCTACTTTTCTGTAAAACCGCAACACTTTTGGCCTACAGCCGGAGCACCATCAAGCACATAGGATCAGCGCTGACCTGTTCAACCCGAACA GCAAGGTTCAACGGAGCGGCGGTCCTATGGCAGCAATACCGAGTCTCGGCATCAACTGGCGGAAGTTACTGTTGATATTGTCCATCGGCGCAATACCGGT ACTGTCCGGGTTACTGATGATGAACTATCAACTGGACAGAAAACTTGAGGAGAATGCCAAGGTTTCTGTTCAAGAGGCGATTTTCAGCATCGACCAGGCA CTGGGCCGCATGGAAGGCGATCTGGACCTGATCCTGCCATTGGCAGGCAAGCCCTGTGACGAAGTGCTTGGTACGCTGGAGCAGAGAGTCGCCAACAGCC CGCACCTTCGCTCACTGATACTCACCCGCGACCAACAAGCGTATTGTGCGACGGACATGGACCCTTTGGCGTATAACTCGGCTTTTGCCCTGTCCGGACG
Amino Acid Sequence
>peptidase C56
MSKKMLVVLTNTAKYPTLKRATGLWLGEAVHFVEKVEKAGYEVDYVSPLGGYVPVDPHSLQMAPDLDWLWYDDKRFMTRLGNTLSPGQVKAEEYSVIYYT GGHGVMYDFPDNQPLQELARRVYEHKGIVAAVCHGVVGLLNIKLSDNSLLLKDRQVTGFSNTEEKLVELDRVVPFLTETELGARGGAYSKHEDPWQPFVV ADDRLITGQNPASTAQLAEKVLARLKRG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site