Pseudomonas sp. C5pp, RR51_RS21865
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. C5pp Contig30, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATGTGCCGGCCAGCGCGCCACCGCTTTCGATCGTGGGCGTGCGCCCGGGCGACAACCTGCGCCGCCCGGCCACCAGCAGCGAGCCGTTGCAACTGTATGT GTCGGCGCTGGGCGGCGGCGGTCGGCGCTGGTGGTTCCTCAACGGCCAGCCATTGGGCGAAACCCAGGGCCAGGACAGCCTGCTGGTGCGCTTCCAACAG GTAGGCCAGGCCGAAATCAGCGCGCTGGATGAAAGCGGCGAGACGGCGCGCGTGGCGTTCCAAGTCAGCGAGTAGCCGTTCGACGAGGGCCGAGGCAGCA CCTACGCTTGCAGGTAACGGGTGTGACCGGCTGGCGCCCCTGATGCCTGTCAGTCAAGCAATTTGGGGCCGCTTTGCGGCCCTTCGCGGGCACGCCCGCT CCCACAGGTTTGGTGCTGGCTTCAGGAAAGCGCGATCTCGGTGGGAGCGGGCGCGCCCGCGAAGGGCTGCAACGCAGCCCCAGGGAACATGGAGCGCCCT
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| DNA Sequence for Gene |
>RR51_RS21865
ATGCGTCCTCTGGCCGTGCCCCTGTTGTTGCTGCCTTGGGCACTTGCGGCCCATGCCGAGCCTTTGCCAGGTTTTCTCGACAGCCATGAGTACGAACGTC GCCTGCCCGGCGCCAACCTGCCGATAGACGCCTACCACCCGGTCAGTGCTCACCTGCAGCTGGCCGGGGAGGATGGCGACAGCCCCGCGTGGGCGCCTGC GAATACCCGGCTGGTGCTGCATAAAGTGCGCTTCGAAGGCGGCACGGTGTTCCCCCTGAGCGACCTGCGCGAACACTACCAACCGCTGATCGGGCGCCAG ACTACCTTGGGCGAGCTCCAGCAGTACACCGCGCGCCTGACCCAGCGCTATCGGCAGGAAGGCTACCTGTTGTCTTACGCCTACCTGCCGCCGCAGGAGG TGGCTGATGGCCAAGTCAATGTGGTGCTGGTCGAAGGCTATATTCGGGATTACCGCGTGGTCGGCGATATCGGCCCGGCAAGCGCCTATCTGCACCAGCT GCTGGAGCGGCTTGCAACCGAGCGCCCGCTGACCCGGGAAACGCTGGAGCGCTACCTGGGCCTGGCCGAGCGCCTGCCAGGGGTGACGATAGACCCACAG CTGGCCATGGCGCGAACCGCTGATGGTGCCACGCTGTTGACCGTGCATGCCCGGCGCAAGCCGTTCAGCGCTGCCGTTACCGTGGTTGATGGCAACCGCG ACGATGCGCAGGCGCTGCTGACGGCAACCAGCCACGCCCAGACCCGCTTTGCCGAACAGATCCAGGCCAGCGTGTTGCTGCCACCAGGGAATGACCAGGT GCATTATCAGCGCCTGGCTTACAGCCAATACCTGGATGCGGGCGGCAGCCAGCTGCTGCTGTCGGCCTCGCGTTATCGCAGCGAACCGGGCACGCGGATT CGGCTGGATGATGGCCGTGATATCACCCGCAAGCGCGACAGCGATCGCTATGCGATCGGCCTGCGCCAGCCGGTGATCGTCAGGCCGGATGAATGGATGG TGGTGCAGGGGCAGGTGTATTCGGTCAGCGAGCACTTCGAAGACCGGGTGGATAGGTCGCCATCGGCACGGGATTACGACACCTACGTGCGTGCGCTGTC ATTCGAGGGCGACTGGCGCAAGGTGGAAGAGGGCCGTTTGCGCATCGTCAGCGCCGGGGTCTATCAGGGCCTGGATTACCTGGGGGCGCGTAGCGATGCC GACTACGATCTGGATTTTCTGCGGTTGCGGCTTTCCGGCTTGCAGAGCGACAGGTTGCTCGGTAACTGGCAGGGGGTGGTGTCCGGGGCGCTGTACTGGA GTGATGACCGCTTGCCCGACAGCGAGCGTGCGGGGTTTGGCGGGCAGAGTTTCGGCCGTGGCTACCCGCGCGACCAGGCGGACGGGGACAAGGGCTGGGG TGTGGCTTACGAGGTGAATTACAGCATGCACGCCAACTGGCTGGCGTTGGTGCAGCCCTATGTGGTGGTTGATACGGCGCAGGCCTGGCATAACCGGGGG CCTGTGCAGGATGCCCACCTGGCTTCGGCGGCGCTTGGTGTGCGGTTGGGCGATGGGCGCTTGTTCAATGTGGCGCTGGAGCTGGCCAAGCCTTTGGCGG ATGTGGCATTGAACAGCCTGGACCGCGCGCCGCGCATGACGTTAAAACTGGCTATCCAGTTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CAGGTGAACCGAGGATCTGTAGGAGCAGCCTTGTGCTGCAAAGAGGCCATTTCAGGCGCAATCTTTTGTATGCCATGAGGGCCCTTTCGCAGCGCAAGGC TGCTCCTACAAAAAAGCGGTGTGCCTACCGGTCACTCAATGGGTAGTAAACCGCTGATGCACCGGCGACGAACTGGGTGTCAGTGCCAGTGCCAGCTGGG TGCGGTTGTGCATGTGGGTCAGGCGCAGCACCTGCGACACATACAGCTTCACGGTATTTTCGGTAATGCCCAGCTCACAGGCGATCTGGTAGTTGGTCTG GCCCTTGCCCACCAGGCGGGCTACTTCCAGCTGGCGTGGCGACAGCTTCTCGAACGCCGCTGGCAGTTCGCTTTCACTCTCGTCCACATCGCTGGCACGC CGGTGCATGCCCTGGCCCCGGGCTTTTTGCAGGTCCTGGTAAAGCTCGTCCATCGACTCTGCCAGCTCTTGCAGACGCTGGCTCAACCCGCCCAGCTCGC
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| Amino Acid Sequence |
>potassium ABC transporter ATPase
MRPLAVPLLLLPWALAAHAEPLPGFLDSHEYERRLPGANLPIDAYHPVSAHLQLAGEDGDSPAWAPANTRLVLHKVRFEGGTVFPLSDLREHYQPLIGRQ TTLGELQQYTARLTQRYRQEGYLLSYAYLPPQEVADGQVNVVLVEGYIRDYRVVGDIGPASAYLHQLLERLATERPLTRETLERYLGLAERLPGVTIDPQ LAMARTADGATLLTVHARRKPFSAAVTVVDGNRDDAQALLTATSHAQTRFAEQIQASVLLPPGNDQVHYQRLAYSQYLDAGGSQLLLSASRYRSEPGTRI RLDDGRDITRKRDSDRYAIGLRQPVIVRPDEWMVVQGQVYSVSEHFEDRVDRSPSARDYDTYVRALSFEGDWRKVEEGRLRIVSAGVYQGLDYLGARSDA DYDLDFLRLRLSGLQSDRLLGNWQGVVSGALYWSDDRLPDSERAGFGGQSFGRGYPRDQADGDKGWGVAYEVNYSMHANWLALVQPYVVVDTAQAWHNRG PVQDAHLASAALGVRLGDGRLFNVALELAKPLADVALNSLDRAPRMTLKLAIQL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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