Pseudomonas sp. C5pp, RR51_RS20750

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. C5pp Contig28, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCGAGGTGTTCAACCCGGTATTCGACGTGACCCCTGCCGACCTGATCGACGTGATCGTGACCGAGCGCGGCATCGTCGAGCGGCCGGATGCCGCCAAGCT GGCGCAACTGATCTGCCGCAAGCGCCTGCACTGATATTCGTAGTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCCACAGGGATAGCACAAGGTCT GAGGGCGGTGGTGTACCTGTGGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCTATAAAAAATCCAGATTTACCCTCGTGTGAGGCCACCTGCCACA TCTCCCCACCGCCCCTGCCTTTGTGATAACATCCGGCAGTTTCCAAGACCGCCCACCACGGCGGCCTTCATTGCGCAGATCCATGGCACAACTCATTGAT TTGTCGTAAGTCGTCGCACCCTTATGCGCTGCGGCGGCGAGCTTCGTTCGGCCCTTGATGGAGCTGCGAAGTTTCACCAGAAAAAGGAATCAGGCTTCTC
DNA Sequence for Gene
>RR51_RS20750
ATGGGCGAACTGGCCAAAGAAATCCTCCCGGTCAATATCGAAGACGAACTGAGACAGTCTTACCTCGACTACGCGATGAGCGTGATTGTCGGGCGAGCGC TGCCCGATGCGCGTGACGGCTTGAAGCCCGTGCATCGTCGCGTTCTCTATGCGATGAGCGAACTGGGCAACGACTGGAACAAGCCGTACAAGAAATCCGC CCGTGTGGTCGGTGACGTGATCGGTAAGTACCACCCGCACGGCGACACCGCGGTCTACGACACCATCGTGCGTATGGCCCAGCCGTTCTCGCTGCGCTAC CTGCTGGTCGACGGCCAGGGCAACTTCGGTTCGGTGGACGGCGACAACGCCGCAGCCATGCGATACACCGAAGTGCGCATGGCCAAGCTGGCCCACGAGC TGCTGGCCGACCTGCACAAGGAGACCGTCGACTGGGTGCCCAACTACGACGGCACCGAGCAGATCCCGGCGGTCATGCCGACCCGTATTCCCAACCTGCT GGTCAACGGTTCCAGCGGTATCGCCGTGGGCATGGCGACCAACATCCCGCCGCACAACCTCGGCGAGGTCATCGATGGCTGCCTGGCACTCATCGACAAC CCCGAAGTCACCATCGATGAGCTGATGCAGCACATCCCTGGCCCCGACTTCCCGACTGCCGGCCTGATCAACGGCCGCCAGGGCATCATCGAGGCCTATC GTACCGGTCGTGGCCGCATCTACATGCGCGCCCGTTCCGAGATCGAAGACATCGACAAGGTCGGTGGTCGCCAGCAGATCGTGGTTACCGAGCTGCCGTA CCAGCTGAACAAGGCACGCCTGATCGAAAAGATCGCCGAGCTGGTCAAAGAGAAGAAGATCGAAGGCATCACCGAGCTGCGCGACGAGTCCGACAAGGAC GGCATGCGCATCGTCATCGAGCTGCGTCGCGGCGAGGTGCCGGAAGTGGTGCTCAACAACCTCTACCAGCAAACCCAGCTGCAGAGCGTATTCGGTATCA ACGTGGTGGCCCTGGTCGACGGCCGTCCGCGTCTGCTCAACCTCAAGGACCTGCTCGAAGCGTTCGTGCGTCACCGCCGTGAAGTGGTGACCCGCCGTAC CGTGTTCGAGCTGCGCAAGGCCCGCGAGCGCGGCCATATCCTCGAAGGCCAGGCGGTCGCGCTGTCCAACATCGACCCGGTCATCGCCCTGATCAAGGCC TCGCCGACCCCGTCCGAGGCCAAGGAAGCCCTGATCTCCACTGCCTGGGAATCCAGTGCCGTGCAGGTCATGGTCGAGCGCGCCGGCGCCGATTCCTGCC GCCCCGAGGACCTGCCGGAGCAGTACGGCCTGCGTGAAGGCAAGTACTACCTGTCGCCGGAACAGGCCCAGGCCATTCTCGACCTGCGCCTGCACCGCCT GACCGGCCTGGAGCACGAGAAGCTGCTGGCCGAGTACCAGGAAATCCTCGAGCAGATCGGCGAACTGATCCGCATCCTCAGCAGCGCCGAGCGCCTGATG GAAGTGATCCGCGAAGAGCTGGAAGCCATCCGCGCCGAATATGGCGATGCCCGCCGTACCGAAATCCTCGATGCGCGCCACGACCTCAACTACGGCGACA TGATCCCGGAAGAAGAGCGCGTGGTGACCATCTCCCACGGCGGCTACGCCAAGACCCAGCCGCTGTCCGCCTACCAGGCCCAGCGCCGTGGCGGCAAAGG CAAGTCGGCTACCGGGGTGAAGGACGAGGACTACGTCGAGCACCTGCTGGTTGCCAACAGCCATGCCACCCTGCTGCTGTTCTCCAGCAAGGGTAAGGTG TACTGGCTGAAGACCTACGACATCCCTGAAGCGTCCCGCGCCGCCCGCGGCCGCCCGCTGGTCAACCTGTTGCCGCTGGAGGAAGGTGAACGCATCACCG CCATGCTGCAGATCGACCTCGAGGCCCTGCAGCAGAACGCTGACGCCGACGAAGAGCTGGAGGACGCGGAGGACACCGTGCTCGAAGGCGAAGTGGTCGA GGCCGAGGAAGTGGACGAGGAAGACGGCGACACCCCTGAATGGGTGGCCGAGCCGACCGGCGCCTACATCTTCATGGCCACCGCTTCGGGTACCGTGAAG AAGACCCCGCTGGTGCAGTTCGCCCGTCCGCGCTCCAACGGCCTGATCGCCCTGAAGCTGAAGGAAGGTGACACCCTGATCGCCGCGGCCATCACCGACG GCGCCAAGGAAGTCATGATGTTCTCCGACGCCGGCAAGGTGATCCGCTTCGCTGAAAGCGTGGTGCGCGAGATGGGCCGTAACGCCCGTGGCGTGCGCGG CATGAAGCTGGGCAAGGGCCAGCAGATCATCTCCATGCTGATCCCGGAATCTGGCGCGCAGATCCTCACCGCGTCCGAGCGTGGCTTCGGCAAGCGCACT CCGCTGTCCAAGTTCCCGCGTCGCGGCCGTGGTGGCCAGGGTGTGATCGCCATGGGCACCAAGGGGCGCAACGGTCTGCTGATCGGTGCCATCCAGGTGC AGGAAGGTGAGGAGATCATGCTGATCTCCGACCAGGGCACGCTGGTGCGTACCCGCGTTGGCGAGGTGTCCAGCCTGGGCCGCAACACTCAGGGCGTGAC CTTGATCAAGCTGGCTGCCGACGAGACACTGGTGGGCCTGGAGCGTATCCAGGAGCCTTCCGAGGACGAACTCGATGATGGGATCGAGGCGGACGAAGAG GGTGTCGAGGCTGAAGTGCCAGACAACGAAGAAGCTGCTGGCGCCGAAGAGGCCCCGCAGGAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCAAGCGTAAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGATTACAGCAGGCAATGGCAGGCCCTGAAGGGGCAGGCGGTTTTTTGTAGGAG CAGCCTTGTGCTGCGAATGGGACGCGAAGCGGCCCGGGATTTCAGCGTCAACGCATGGATAGCCGGGGCCGCTACGCGTCCCATTCGCAGCACAAGGCTG CTCCTACAAGAGCGATGCGAGGCCTGCAAGAAACGAATTTGTACCATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAACTTCTGCGCAGGC CCTGCCGCGCTTCCTGACGCTGTTCTGCAGCGCGCCCAGGCCGAAATGCTGGATTGGCGTGGCAAGGGCTTGTCGGTGATGGAAATGAGCCATCGTAGCG ACGATTACGTGGCCATCGCCGAAAAGGCCGAGCAGGACTTGCGTGACCTGCTGTCCGTCCCCTCCAACTACAAGGTGCTGTTCCTGCAGGGCGGCGCCAG
Amino Acid Sequence
>DNA gyrase subunit A
MGELAKEILPVNIEDELRQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWNKPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRY LLVDGQGNFGSVDGDNAAAMRYTEVRMAKLAHELLADLHKETVDWVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMATNIPPHNLGEVIDGCLALIDN PEVTIDELMQHIPGPDFPTAGLINGRQGIIEAYRTGRGRIYMRARSEIEDIDKVGGRQQIVVTELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD GMRIVIELRRGEVPEVVLNNLYQQTQLQSVFGINVVALVDGRPRLLNLKDLLEAFVRHRREVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKA SPTPSEAKEALISTAWESSAVQVMVERAGADSCRPEDLPEQYGLREGKYYLSPEQAQAILDLRLHRLTGLEHEKLLAEYQEILEQIGELIRILSSAERLM EVIREELEAIRAEYGDARRTEILDARHDLNYGDMIPEEERVVTISHGGYAKTQPLSAYQAQRRGGKGKSATGVKDEDYVEHLLVANSHATLLLFSSKGKV YWLKTYDIPEASRAARGRPLVNLLPLEEGERITAMLQIDLEALQQNADADEELEDAEDTVLEGEVVEAEEVDEEDGDTPEWVAEPTGAYIFMATASGTVK KTPLVQFARPRSNGLIALKLKEGDTLIAAAITDGAKEVMMFSDAGKVIRFAESVVREMGRNARGVRGMKLGKGQQIISMLIPESGAQILTASERGFGKRT PLSKFPRRGRGGQGVIAMGTKGRNGLLIGAIQVQEGEEIMLISDQGTLVRTRVGEVSSLGRNTQGVTLIKLAADETLVGLERIQEPSEDELDDGIEADEE GVEAEVPDNEEAAGAEEAPQE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site