Pseudomonas sp. C5pp, RR51_RS19465

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. C5pp Contig25, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCGCAGGATGGTGCTGCTGAAACCGTGACTGCCAAGTAATACCGCCCAAGGGCCGCTTTGCGGCCCGTTCGCAGCACAAGGCTGCTCCTACAAGGGTACC GCGCAAGATTACGCCACCCTGTAGGAGCAGCCTTGTGCTGCGAACGGGCTGCAAAGCAGCCCCTCTCCCCGCTCTACCCCTCCTTGCACCCCCTCCGAAC ACAACTAAGCTTGTTGCCTCAGTGGGCCTCGCTCCGAAAGGACCGAAGCAGACGCGGCGCGTAGCCTGTCGCCGTCCCGATAAAAAGCTTGACCGATCGA TCAGAAAAAAGCGAAAAACGGTACACATTACAAATATTTATTTGTGTACAATCGTCCAGACCCGATCGCTGCGGGACATCAGTGAACGGGCTCGGGCACG GGTCGGCGTACCAAAGTTGCGTTGCAGTAACCCCGGTGGTTATCAATACTGGCGCCGATTTTTCGACCAACAAGAACATCAAAACCGTGGAACCTTAGCA
DNA Sequence for Gene
>RR51_RS19465
ATGAGCACAGCAATCAGTCCGACTGCTTATAACTATAAGGTCGTCCGCCAGTTCGCCATCATGACGGTGGTCTGGGGGATCCTTGGCATGGGCCTCGGCG TCTTCATCGCCTCGCAGCTGGTATGGCCGCAACTGAACCTGGACCTGCCCTGGACCAGCTTCGGCCGCCTGCGCCCGCTGCACACCAACCTGGTGATCTT CGCCTTCGGGGGCTGTGCGCTGTTCGGCACCAGCTACTACGTGGTGCAGCGCACCTGCCAGACCCGGCTGATCTCCGACAGCATGGCCGCCTTCACCTTC TGGGGTTGGCAGGCAGTGATCGTCGGGGCGCTGATCACCCTGCCGATGGGCTACACCACCACCAAGGAGTACGCCGAGCTCGAGTGGCCGCTGGCGATCC TGCTGGCCATCGTCTGGGTCACCTACGGGTTGGTGTTCTTCGGCACCATCGTCAAACGCAAGACCAAGCACATCTATGTCGGCAACTGGTTCTACGGCGC CTTCATCGTGGTTACCGCGATGCTGCACATCGTCAACCACATCTCGCTGCCGGTAAGCCTGTTCAAGTCGTACTCGGCCTACTCCGGCGCCACCGACGCG ATGATCCAGTGGTGGTACGGCCACAACGCCGTGGGCTTCTTCCTGACCACCGGCTTCCTGGGGATGATGTACTACTTCGTACCGAAGCAGGCCGAACGCC CGATCTACTCGTATCGCCTGTCTATCGTGCACTTCTGGGCACTGATCACCCTGTACATCTGGGCCGGTCCGCACCACCTGCACTACACCGCCCTGCCTGA CTGGGCGCAGTCGCTGGGCATGGTGATGTCGATCATCCTGCTGGCGCCAAGCTGGGGCGGCATGATCAACGGCATGATGACCCTGTCCGGTGCCTGGCAC AAACTGCGCACCGACCCGATCCTGCGCTTCCTGGTGGTGTCGCTGGCGTTCTACGGCATGTCCACCTTCGAAGGCCCGATGATGGCCATCAAGACCGTGA ACTCGCTGTCGCACTACACCGACTGGACCATCGGCCACGTCCACGCCGGCGCCCTCGGCTGGGTGGCGATGATCTCGATCGGCGCCGTGTACCACATGAT CCCGCGCCTGTATGGCCGCGAGCAGATGCACAGCGTCGGCCTGATCAACGCGCACTTCTGGCTGGCTACCATCGGTACCGTGCTGTACATCGCCTCGATG TGGGTAAACGGCATCACCCAGGGCCTGATGTGGCGCGCCATCAACGACGACGGCACCCTCACCTACTCCTTCGTCGAAGCCCTGCAGGCCAGCCACCCTG GCTATATCGTCCGCGCCCTGGGCGGTGCGTTCTTCGCCACCGGCATGCTGCTGATGGCCTACAACGTGTTCCGTACCGTACGTGCCGCCAACCCGGCACA GGCTGAGGAAGCCGCCAAGATCGTCGTCGTGGGAGCGCACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTT TCAGGACGTCACCAACAAACCCGTGGAAGGCATGAAGCCGCGCACCGCGCTGGAGCTTGAAGGCCGCGATATCTATATCCGCGAAGGCTGCGTGGGCTGC CACTCGCAGATGATCCGCCCGTTCCGTGCCGAAACCGAGCGCTACGGCCACTACTCGGTGGCTGGCGAGAGCGTGTGGGACCACCCGTTCCTGTGGGGCT CCAAGCGTACCGGGCCGGACCTGGCGCGGGTCGGTGGCCGCTACTCCGATGACTGGCACCGTGCGCACCTGTACAACCCGCGCAACGTGGTACCGGAATC GAAGATGCCGTCGTACCCGTGGCTGGTCGAGCACAAGCTCGACGGCAAGGACACCGCGAAGAAGATGGAAGTGCTGCGCACCCTCGGCGTGCCATACACC
Amino Acid Sequence
>cbb3-type cytochrome c oxidase subunit I
MSTAISPTAYNYKVVRQFAIMTVVWGILGMGLGVFIASQLVWPQLNLDLPWTSFGRLRPLHTNLVIFAFGGCALFGTSYYVVQRTCQTRLISDSMAAFTF WGWQAVIVGALITLPMGYTTTKEYAELEWPLAILLAIVWVTYGLVFFGTIVKRKTKHIYVGNWFYGAFIVVTAMLHIVNHISLPVSLFKSYSAYSGATDA MIQWWYGHNAVGFFLTTGFLGMMYYFVPKQAERPIYSYRLSIVHFWALITLYIWAGPHHLHYTALPDWAQSLGMVMSIILLAPSWGGMINGMMTLSGAWH KLRTDPILRFLVVSLAFYGMSTFEGPMMAIKTVNSLSHYTDWTIGHVHAGALGWVAMISIGAVYHMIPRLYGREQMHSVGLINAHFWLATIGTVLYIASM WVNGITQGLMWRAINDDGTLTYSFVEALQASHPGYIVRALGGAFFATGMLLMAYNVFRTVRAANPAQAEEAAKIVVVGAH
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site