Pseudomonas sp. C5pp, RR51_RS17030

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. C5pp Contig20, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAGGACAACCTGGTCGAGAACATCAACCGCGGCGACGAAAACTACCTGGCCCTGCTGGATGCCGCCGATGCCTATATCGAACGCAACGGCCTGGACCTGC CGGAAGAGCCCGAAGCCCGCAAACGCCTGGCCGACCCTGAGTGCATGCGCAACCCGCTGCAGCAACTGGACCTGGCCAAGGCCGGTGTCACCAGCATCAT CTGGGCCACCGGTTACGGTGTCGACTTCAGCTGGCTGCAGGTCGACACCTTCGACGCCAACGGCAAGCCCCAGCACCAACGCGGCGTGGCCCGCGAGCCG GGTGTGTACTTCCTTGGCCTGCCGTGGCTGTCGCGTCGTGGCTCGTCGTTCATCTGGGGCGTGTGGCACGACGCCAAGCACGTCGCCGGCCACATCGCCA CGCAACGCACCTATGCCGCCTACCGCGACCGCGAACAACGCGCAGCGGATGAGCAGCAGCAACCCAAGATCAGCAACGTCAGCACCCTCGGAGCCCACTG
DNA Sequence for Gene
>RR51_RS17030
ATGCCTACTCATACCCGCATCCGCATGTTCAACACCAAGGCCACCTACCCCAACCAGACCCTGGACAACGACCTGTGCCAGGCGGTGCGCGCCGGCAACA CTATCTACGTGCGCGGCCAGGTCGGCACCGACTTCGAAGGCAACCTGGTGGGCCTGGGTGACCCACGGGCGCAGACCGAGCAGGCAATGAAGAACGTCAA GCAACTGCTCGAAGAAGCCGGCTCGGACCTGTCGCACATCGTCAAGACCACCACCTACATCACCGACCCGCGCTTCCGCGAGCCGGTGTACAAGGAGGTA GGCAAGTGGCTCAAGGGCGTGTTCCCGATTTCCACCGGGCTGGTGGTGGCCGGGTTGGCCCAGGCCGAGTGGCTGATGGAGATCGATGTGATCGCCGTGG TGCCAGATTCGGTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGATCGGTTCAACCTGTAGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAACGCGGCCCCAGGATTGATGCGCAACACTTGAAATTGCTGGGGCTGCTTTG CAGCCCTTTCGCGACACAAGGCCGCTCCTACAGGGAACGCGCCCACTTTTGAAATGGGCTAGAAACCCACTGTCGCCGACAGCAGGTAGGTACGCGGCGT AGACAGCGTCAGCCCCGGCTCGCTGTCATCCGAAGCTCCGGCCGAGCTCCAGTAGCGGTCGTCCAGCACGTTCTCGACACTGGCGCGCAAGGTAACCTGG GTGGCATCCACCTTGAACGCATAACGCGCCCCCAGGTCGTAACGCTCCCAACCGTCGATCTGCTTGCTGTTGTTCTGGTCCAGGTACTGCGAGCTCGAGT GGATGCCCCGCGCCGTCAGGGTCAGGCCGTTCACCCCAGGCACGTCCCATTCGGCACCAAGGTTGACGTTGTACTCGGGCGTGGCCGGCGCGCGGTTGCC
Amino Acid Sequence
>endoribonuclease
MPTHTRIRMFNTKATYPNQTLDNDLCQAVRAGNTIYVRGQVGTDFEGNLVGLGDPRAQTEQAMKNVKQLLEEAGSDLSHIVKTTTYITDPRFREPVYKEV GKWLKGVFPISTGLVVAGLAQAEWLMEIDVIAVVPDSV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site