Pseudomonas sp. C5pp, RR51_RS14885

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. C5pp Contig16, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GACAGCTTTTCAAAATTTAATGATTCTTGAATGTACTACTGCATCAGGCGGCTTGCGCCCCGTGTTTACGGCACTTTCCGACCCCCGGTAGCAGGTTTTG TGAAAATTTCATGAAGCGTTGTGAATTTTGAGCACGCTTGTTGCATTCCTTTCACGCCAAGTCGGCACGACATCTGCATCGGCGGGTGAACGCGACAAAT AACAACAGCGACAGTGGTTACCAGGGAGTTTCCCAACCGGAATCGGTAGTTACAGGTTCATTACGGTGAAAGAAGCAGCGCTGGTGTTGACGGCCCTTAA ACCGGGGCGTGATTTGCGACATGGAACTACCTAGAAGCGACATGGTGAAAAAGTTCCGAAAAGGATGCTTATACCCATATCGCCAAGAACAGTCAGCGTG CTATACATTTTCGCCGACATAACAAGAAAGAGCTGCCCCATATAACTAGAACACTTGGACGCAGCGGTACTCTTCCTAAAAACCAAAGGAGCAAATCACG
DNA Sequence for Gene
>RR51_RS14885
ATGCGCGTGATGAAGTGGAGCATGATCGCCCTGGCCGTTGCGGCAGGGACCTCGCAGTTGGCATTGGCCTCTTCCCAGGACGAGTCCAAAGGTTTCATCG AAGACAGCAAGCTGAACGTCAAGACCCGCATGCTGTACTTCAGCCGTGACTTCCGTAACAACCCAGCCGGCACCCAGAGCCGTCGCGAAGAAACCGGCCT GGGCTTCCTCGGCACCTTCGAGTCCGGCTTCACCCAGGGCACCGTGGGTGTGGGTGTCGATGCCATCGGCATGCTCGGCCTGAAACTGGACAGCGGCAAG GGCCGCGCCGGTACCGGCCTGTTCCCTACCGGCTCTGACGGCCGTTCGCAGGATGACTACTCCAAAGCCGGCGGCGCGGTTAAATTCCGCATCTCCGACA CCGTGCTGAAAGTGGGTGACCAGTTCACCGCTCTTCCGGTCTTCGCCACCGACGACAGCCGCCTGCTGCCTGAAATCGCCCAGGGCACCCTGATCACCAG CAACGAGATCGAGGGCCTGACCCTGCACGCTGGTCATTTCACCAGCCTGACCGCCCAGGAGCAGACCAACCGCGACAGCTTCGGCCTGAAGGAAGCCAAC GTGGTAGGTGGTACCTACGCCTTCACCGACAACCTCAGCACCAGCCTGTACTACTCGAAGGTTGAAGACTACTGGCGCAAATACTACGCCAACGTCAACT GGGCACTGCCGATCTCGGACAAACAAGGCCTGGTGTTCGACTTCAACATCTATGACACCAAGAGCGAAGGCTCGGCCGAGTACCGCGCATTCGATGGCGA CAAGCTGGACAACCGCGCGTTCAGCCTGTCGGGCGCCTACAACATCGGCGCTCACACCTTCACCCTGGCCTACCAGAAAGTCACCGGCGACGGCGACTAT GGCTATGGCATCGACGGCGGCGGCACCATCTTCCTGGCCAACTCCGTGGCCCGTTCCGACTTCAACGCCGAAGACGAGAAGTCCTGGCAGGCTCGCTACG ACCTGAACTTCGCCGAATACGGCATCCCGGGCCTGACCTTCATGACCCGTTATGTACGTGGTACCGACGCCAACGTCGCCGGCACCAGCAACGGCAAGGA ATGGGAACGCGACGTCGACATCAAGTACGTGCTGCAGAGCGGCCCGGCAAAAGACCTGAGCTTCCGCGTGCGTCAAGCCACCTATCGCTCTTCCGATGGC GTCTACTACGATTCCCCATCGATCGACGAACTGCGCCTGATCGTGGAGTACCCGCTGAGCATCCTGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCTGGCTTGCAGTGCCCCGCACCTGAAAAAGCCCGGCGATCACGCCGGGCTTTTTCTTGGCTGACAAGCGTCACGCCCTGGGGCATCCTGTACGCCTTC GTTTCGCCCCCGTACAATGCGGGGTCATTTCAATGTCTTAGGCAATCGACACGGCTCACCATGCGCACCAGTCAATATTTGCTCGCCACCCAGAAAGAAA CCCCTGCCGACGCAGTGGTCATCAGCCATCAGCTCATGCTGCGTGCCGGCATGATCCGCAAACTGGCCTCTGGCCTGTACACCTGGCTGCCGATGGGCTT GCGGGTGATGCGCAAGGTCGAGGCCGTGGTGCGTGAGGAAATGAACGCCGCCGGCGCCCTGGAAGTGCTGATGCCCAGCATCCAGCCCGCCGAACTGTGG CAGGAATCCGGCCGCTGGGAACAGTATGGCCCCGAGCTGCTGCGCCTGAAGGACCGCCACCAGCGCGACTTCTGCGTCGGCCCGACCCACGAGGAAGTGA
Amino Acid Sequence
>membrane protein
MRVMKWSMIALAVAAGTSQLALASSQDESKGFIEDSKLNVKTRMLYFSRDFRNNPAGTQSRREETGLGFLGTFESGFTQGTVGVGVDAIGMLGLKLDSGK GRAGTGLFPTGSDGRSQDDYSKAGGAVKFRISDTVLKVGDQFTALPVFATDDSRLLPEIAQGTLITSNEIEGLTLHAGHFTSLTAQEQTNRDSFGLKEAN VVGGTYAFTDNLSTSLYYSKVEDYWRKYYANVNWALPISDKQGLVFDFNIYDTKSEGSAEYRAFDGDKLDNRAFSLSGAYNIGAHTFTLAYQKVTGDGDY GYGIDGGGTIFLANSVARSDFNAEDEKSWQARYDLNFAEYGIPGLTFMTRYVRGTDANVAGTSNGKEWERDVDIKYVLQSGPAKDLSFRVRQATYRSSDG VYYDSPSIDELRLIVEYPLSIL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site