Pseudomonas sp. C5pp, RR51_RS12695

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00388
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00388
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF47384 Homodimeric domain of signal transducing histidine kinase IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily 392 474 3.92E-9
CDD cd12914 PDC1_DGC_like - - 95 195 8.07025E-10
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 481 623 1.3E-32
PANTHER PTHR43065 SENSOR HISTIDINE KINASE - - 201 629 5.3E-48
Coils Coil Coil - - 379 399 -
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 585 603 5.1E-12
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 609 622 5.1E-12
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 572 582 5.1E-12
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 471 624 8.8E-34
Gene3D G3DSA:1.10.287.130 - - - 384 470 5.4E-18
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 554 568 5.1E-12
PIRSF PIRSF036431 HK_DctB IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) 9 632 0.0
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 516 623 2.0E-18
Gene3D G3DSA:6.10.250.3020 - - - 51 111 1.6E-7
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 515 625 2.7E-26
Pfam PF02743 Cache domain IPR033479 Double Cache domain 1 50 228 3.8E-15
SMART SM00388 HisKA_10 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 408 476 1.8E-5
CDD cd00082 HisKA IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 406 472 1.28637E-5
Gene3D G3DSA:3.30.450.20 PAS domain - - 195 311 5.2E-25
SUPERFAMILY SSF103190 Sensory domain-like IPR029151 Periplasmic sensor-like domain superfamily 79 203 2.33E-13
Gene3D G3DSA:3.30.450.20 PAS domain - - 115 193 5.6E-28
Coils Coil Coil - - 351 371 -
FunFam G3DSA:1.10.287.130:FF:000049 C4-dicarboxylate transport sensor protein DctB - - 384 471 3.8E-32

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.